Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02373 ATGGGTTTGCAAAGCGAATTAAACGACGTGTCGTCGGGTTCGATTCCGCTGCTGGTGTTGGCGCAGATAGCCATGTGCGTCAACTACCTCCGTTCGATGCTCCTCGCGGTGTTGCAATCCCTAGGTCTCGCCCGATTCCACACCCACCAGATCGTCGACGACCGCTTCCTCGCCGCCGTCGGATCCGGCCTCGCCGGACTCATCATGCTCTCCGATCAGCTCAAGCTCAACAACCAATTCTTCTTCTACGAAGGAGCCGCCCACGACCACCCCTGCGTCGTCTGCCAGGCCGCCTTCCAGGACGGCGACCAGCTCCGCATGCTCCCCTGCCGCCACGTCTTCCACCGCCGCTGCTTCGACGGGTGGCTCCACCACTACAAGTTCAACTGCCCCCTCTGCCGCTCCCCGCTCCTATCCGACGAGCGCGTGGCCCTCACCGAACGCCGCCTCGGCCAACAACTCATCTCTTGGTTCTCCCTTCACTGA 486 0.6235 MGLQSELNDVSSGSIPLLVLAQIAMCVNYLRSMLLAVLQSLGLARFHTHQIVDDRFLAAVGSGLAGLIMLSDQLKLNNQFFFYEGAAHDHPCVVCQAAFQDGDQLRMLPCRHVFHRRCFDGWLHHYKFNCPLCRSPLLSDERVALTERRLGQQLISWFSLH* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02373 161 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Lapu7g02373 161 PANTHER RING ZINC FINGER PROTEIN-RELATED 85 144 - -
Lapu7g02373 161 SUPERFAMILY RING/U-box 85 140 - -
Lapu7g02373 161 SMART ring_2 92 133 IPR001841 -
Lapu7g02373 161 Pfam Ring finger domain 92 134 IPR001841 -
Lapu7g02373 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 73 143 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02373 Lapu-Chr7 39942280 39943265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02373 1 161 C3H Transcription Factor Family AT1G15100 46.626 7.01e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02373 K16282 - gmx:100803789 284.648