Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02342 ATGGCGGGTTTTGGCGGGAAAAAAGTGCACCAAATGGTCGTCGGTTTCGGCGGCAGCGGCTTCGGCCAGGTCGCCATCGCTGTCGCTGTCTCCTTCCTCGTCCGCGTCTTCTCCTCTCCCGGCCCTGCTCTCCCGCCGGAAAACGACCCCGACGATACGCTGGAGAACGGTTCCGACGATGCCGAAGCTACTGCAGCGGGAAAGGTCACACCGGTCACTATCAGCTGGACAAACATCAATTGCTCCCTTTCCGATAAATCCTCCAAGTCCGTAAGGTTTCTGCTTAGAAATGTGAGTGGAGAAGCGAGGCCTGGAAGGTTATTAGCCATAATGGGACCTTCTGGTTCTGGGAAGACAACGTTGCTTAATGTTCTTGCGGGTCAGCTCACAGCATCTCCTCGGTTGCATTTGAGTGGCGTTTTGGAGTTCAATGGAAAACCTGGTTCAAAGAACGCGTACAAGTTTGCATATGTGAGACAAGAGGATCTCTTTTTCTCGCAGCTCACTGTGCGTGAGACTTTGTCTCTTGCTACCGAACTTCAGCTTCCCAACATATCTTCTGCGGAAGAGAGGGATGAGTTCGTGAACAGTCTCCTTTTCAAACTAGGCTTGGTTAGTTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTGTCCATGGCATGTGAACTGCTTGCAAGTCCATCTGTTATATTTGCCGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAGCAACTTGCACAAGACGGTCATACTGTTATATGTTCTATACATCAGCCAAGAGGTTCAGTGTATAGTAAATTTGATGATATCATCTTGCTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTGATGAACCACTGGCATACTTCTCAAAATTTGGGTACCAGTGCCCAGATCATATAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGATAGTGTCTATACCTCTCAAAAAAGAATTGATGGTCTTGTTGAGTCATTCTCGCAAAGGTTATCAAGAGTTATATACACAACCCCAATTACTGTAAACAATCACTCGAACAGTAGAAAGAAAATCAGCCAGAGGGGAGTAGCAAAGAAGAAAGGAGTTTGGTGGAAGCAATTTTGGTTGCTCCTTAAAAGAGCATGGATGCAGGCTTCGCGTGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCATCGGCAATTATCTTTGGGTCAGTATTTTGGAGGATGGGAAATTCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTACTGCAATAAATACAGCTATGGCTGCTCTCACAAAGACTGTAGGTGTGTTTCCCAGGGAACGGGCAATTGTGGATAGAGAACGTGCTAAAGGCTCTTATTCCTTAGGTCCCTATCTGTTCTCAAAATTGTTGGCTGAGCTTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTACTGTTTTGTATCCGATGGCACGACTTCATCCTACTTTGCAGAGATTTGGAAAGTTCTGTGGCATTGTCACCATGGAATCTTTTGCTGCATCTGCTATGGGTCTTACTGTTGGTGCTATGGTTCCAAACACTGAAGCCGCAATGGCAGTAGGTCCCTCTCTCATGACAGTTTTTATTGTTTTTGGAGGCTACTATGTCAATCCTGAGAATACGCCAATCATCTTCCGCTGGATTCCTAATGTTTCTCTGATTAGATGGGCTTTTCAGGGAGTCTCTATCAATGAATTTAGTGGTCTTCAATTCGACCATCAACATTCGTTTGATATTCAAACTGGAGAACAGAATATGCGGATATGTGGTTTCTTGAATGCTGATCCAACTCATATTGGTTTTCCCTTCCCTTTTTCACAGGCGCTAGAGCGAATTTCCTTTGGGAAAAGTAGGATTAGGGATACGGTGATAGCACAAAATAGAATACTACTATTTTGGTATTGCACCACCTATCTTCTCCTCGAGAAAAACAAACCCAAATACCAGCAACTTGAAACCCCTATTGACGACAACAAGCCGCTTTTAAAACTTGAGGAGCTCAATTCTGAACAAGTTGATCAGACAGTTGAAGCTCCGCCAGTCGGCCAAGTTGATTCTAACCAGCCCCCTGAGTCACCTGGAGTAGATCTTGTTGGCCCCTTCGTCCTCGAAGGTGCTAAGTAG 2247 0.4535 MAGFGGKKVHQMVVGFGGSGFGQVAIAVAVSFLVRVFSSPGPALPPENDPDDTLENGSDDAEATAAGKVTPVTISWTNINCSLSDKSSKSVRFLLRNVSGEARPGRLLAIMGPSGSGKTTLLNVLAGQLTASPRLHLSGVLEFNGKPGSKNAYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEFVNSLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIILLTEGSLVYAGPARDEPLAYFSKFGYQCPDHINPAEFLADLISIDYSSADSVYTSQKRIDGLVESFSQRLSRVIYTTPITVNNHSNSRKKISQRGVAKKKGVWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPRERAIVDRERAKGSYSLGPYLFSKLLAELPIGAAFPLMFGTVLYPMARLHPTLQRFGKFCGIVTMESFAASAMGLTVGAMVPNTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPNVSLIRWAFQGVSINEFSGLQFDHQHSFDIQTGEQNMRICGFLNADPTHIGFPFPFSQALERISFGKSRIRDTVIAQNRILLFWYCTTYLLLEKNKPKYQQLETPIDDNKPLLKLEELNSEQVDQTVEAPPVGQVDSNQPPESPGVDLVGPFVLEGAK* 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02342 748 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Lapu7g02342 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 306 IPR027417 -
Lapu7g02342 748 CDD ABCG_EPDR 71 302 - -
Lapu7g02342 748 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 67 626 - -
Lapu7g02342 748 Gene3D - 65 309 IPR027417 -
Lapu7g02342 748 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Lapu7g02342 748 SMART AAA_5 104 297 IPR003593 GO:0016887
Lapu7g02342 748 MobiDBLite consensus disorder prediction 713 731 - -
Lapu7g02342 748 Pfam ABC-2 type transporter 277 345 IPR043926 GO:0140359
Lapu7g02342 748 MobiDBLite consensus disorder prediction 713 740 - -
Lapu7g02342 748 FunFam ABC transporter G family member 7 72 310 - -
Lapu7g02342 748 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Lapu7g02342 748 Pfam ABC transporter 95 247 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02342 Lapu-Chr7 39636740 39643736 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02342 94 385 Calmodulin-binding Proteins AT2G36910 25.676 2.54e-10 62.4