Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02316 ATGGGTAGCCTTGAAGAGGAAAGAACAACAGTAGGATGGGCAGCAAGAGACCCTTCGGGGATTCTCTCTCCATACACCTATAATCTAAGAAACACTGGCCCTGATGATGTCTACATCAAAGTTCACTACTGTGGAATTTGCCATTCAGATCTCCACCAGATTAAAAACGATCTGGGCATGTCCAATTATCCCATGGTCCCCGGACACGAAGTGGTTGGTGAGGTACTGGAGGTGGGGTCAAACATTGACAGGTTCAAAGTTGGTGAAATGGTTGGAGTGGGACTCCTCGTAGGTTGCTGCAAAAACTGCAGCCCATGCCAATCAGACATTGAGCAGTATTGCAGCAAGAAAATTTGGTCTTACAATGATGTTTACATCGATGGAAAGCCCACTCAGGGTGGCTTTGCTGAAACCATGATCGTCGAACAAAAGTTTGTGGTGAAAATTCCAGATGGTTTGGCGCCAGAGCAAGTTGCACCGTTGCTGTGTGCGGGTGTGACTGTGTACAGTCCTCTGTCACATTTTGGGCTGAAAGAGAGAGGGCTGAGGGGTGGAATATTGGGGCTTGGAGGAGTGGGACACATGGGAGTGAAGATAGCAAAGGCACTGGGTCACCATGTGACTGTGATAAGTTCTTCTGACAAGAAGAAACAGGAGGCACTTGAACACCTTGGAGCTGACCAATATCTTGTTAGTTCTGATGCCACTGCTATGCAGGAAGCTGCTGATTCACTTGACTACATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTCTCTTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGGGTCATCAACACCCCTCTGCAATTTGTTAGCCCCATGGTCATGCTAGGGAGGAAATCAATAACTGGAAGTTTCATTGGGAGCATGAAGGAGACAGAGGAGATGTTGGAGTTCTGGAAAGAGAAGGGACTGAGTTCTATGATTGAAGTGGTGAACATGGATTACATTAACAAGGCTTTTGAAAGGTTGGAGAAGAACGATGTGAGATACAGGTTTGTTGTGGATGTTAAAGGGAGCAAACTTGAAGAGTAA 1074 0.4646 MGSLEEERTTVGWAARDPSGILSPYTYNLRNTGPDDVYIKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNIDRFKVGEMVGVGLLVGCCKNCSPCQSDIEQYCSKKIWSYNDVYIDGKPTQGGFAETMIVEQKFVVKIPDGLAPEQVAPLLCAGVTVYSPLSHFGLKERGLRGGILGLGGVGHMGVKIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDATAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLEFWKEKGLSSMIEVVNMDYINKAFERLEKNDVRYRFVVDVKGSKLEE* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02316 357 Gene3D - 13 350 - -
Lapu7g02316 357 Pfam Zinc-binding dehydrogenase 191 312 IPR013149 -
Lapu7g02316 357 FunFam probable cinnamyl alcohol dehydrogenase 13 170 - -
Lapu7g02316 357 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
Lapu7g02316 357 PANTHER ALDEHYDE REDUCTASE 6 352 IPR047109 GO:0016616
Lapu7g02316 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Lapu7g02316 357 SUPERFAMILY GroES-like 16 181 IPR011032 -
Lapu7g02316 357 CDD CAD1 11 349 IPR047109 GO:0016616
Lapu7g02316 357 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Lapu7g02316 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 318 IPR036291 -
Lapu7g02316 357 Pfam Alcohol dehydrogenase GroES-like domain 34 149 IPR013154 -
Lapu7g02316 357 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491
Lapu7g02316 357 Gene3D - 164 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02316 Lapu-Chr7 39382801 39385028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02316 1 357 Monolignol Biosynthesis Gene Families AT3G19450 77.933 0.0 530