Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02300 ATGATGATCAAAGAAGATGAAACAATTCTATCGACAGCCAAAGAACAACAAGGTGAAGTGATGCACGGAGACACAGACAACTACGGAAGCGAAGATGACAACCCCAAAGAGTGGTTGAACCTGAACATAGGAGGCAGTTCACTCTCAACTGCTGGAGACCCTGATTTGCAATCAAGACCAGTCACTGCAAAAGTTTTTTCATGCAACTTCTGCATGAGGAAGTTCTTCAGTTCACAGGCATTAGGAGGTCATCAAAACGCCCACAAGAGGGAAAGGGGTGCAGCCAGAAGATACCAATCTCAGAGGTCGATGGCAATAATGGGCTTCTCCATGAACACACCAACTATGCTTCGATCACTTGGTGTCCAGCCCCATTCACTCCTGCACAAGCCATGCAGAGGTGGTACTGTGGTAGCACCCAGCTTTCATGATGCACGTGCAAGGCTTGGGATGGCTTGGACGCCTTTCTCGTCAGAGGATCAAACAGATCTGTTGTGGCCAGGTAGCTTTCGCTTGGTTCCACAACAGCCCCAGCCACCACAGGAACCACTCAAGCTTGATTTAGACCTCAGACTCTGA 579 0.4888 MMIKEDETILSTAKEQQGEVMHGDTDNYGSEDDNPKEWLNLNIGGSSLSTAGDPDLQSRPVTAKVFSCNFCMRKFFSSQALGGHQNAHKRERGAARRYQSQRSMAIMGFSMNTPTMLRSLGVQPHSLLHKPCRGGTVVAPSFHDARARLGMAWTPFSSEDQTDLLWPGSFRLVPQQPQPPQEPLKLDLDLRL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02300 192 Gene3D Classic Zinc Finger 56 112 - -
Lapu7g02300 192 MobiDBLite consensus disorder prediction 172 192 - -
Lapu7g02300 192 SUPERFAMILY beta-beta-alpha zinc fingers 63 92 IPR036236 -
Lapu7g02300 192 MobiDBLite consensus disorder prediction 19 33 - -
Lapu7g02300 192 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Lapu7g02300 192 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Lapu7g02300 192 PANTHER ZINC FINGER PROTEIN 4-LIKE 2 192 - -
Lapu7g02300 192 MobiDBLite consensus disorder prediction 13 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02300 Lapu-Chr7 39276739 39277317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02300 64 180 C2H2 Transcription Factor Family AT1G24625 44.167 1.14e-20 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02300 7 39276739 39277317 Lapu7g02300 7 39276739 39277317 ECH