Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02289 ATGCTGCGTCTGTGCTACGGTCCTCTCGATTGCTGCTTCCGACGCCGTGGTGGCGCTGACGGACTTCTCTGGCACACCGACTTGAAGCCCCACGCCTCTGGCGACTTCTCCATCGCCGTCGCTCAGGCCAATTACAGTCTCGAGGATCAGAGCCAAGTCTTCACCTCCCCCTCTGCTACCTACGTCGGCGTCTACGACGGCCACGGCGGCCCCGAAGCTTCTAGATTCGTCAACAAACGACTCTTCCCTTATTTACACAAATTTGCTACTGAGCAAGGAGGTTTGTCTGTGGACGTCATAAAAAAGGCATTTAGTGCCACAGAAGAGGAGTTCCTGCATTTGGTGAAGCTATCCTTGCCCATTAGTCCCCAGATTGCTTCTGTGGGATCATGTTGTCTTTTTGGTGCAATTTCTAATAATGTGTTGTATGTTGCCAACCTCGGAGACTCTAGAGCCGTGCTTGGCAGGAGGGATGTAGAGAGAAAGAACAGTCCAGTGGTGGCGCAGCGCTTGTCAACTGATCATAATGTAGCTGATGCGGAGGTGAGAAGAGAAGTTGAAGCTCTCCATCCTGATGACTCACACATAGTGGTTTATAGCCGAGGAGTTTGGAGGATTAAGGGCATTATTCAGGTGTCAAGATCCATTGGTGATGTGTATTTGAAGAAACCTGATTTCTACCGAGATCCTGTTTTTCAGCAATTTGGAAATCCTGTTCCTTTGAAGCGTCCTGTGATGACAGCTGAACCATCAATCATTATTAGGGAGCTTGAGTCGGAGGATTTATTCTTGATATTTGCATCCGATGGCCTGTGGGAACAATTAAGTGATGAAGCAGCAGTTCAGATTGTTTTCAAGTATCCAAGAGCTGGAATTGCCAAGAGACTGGTGAGAGCGGCTCTTCAAGAAGCTGCCAAGAAGAGAGAGATGAGATACGATGACATAAAGAAAATCGACAAAGGAATAAGACGACACTTCCATGATGATATTACTGTGATTGTAATCTATCTTGATCACCATGCGGGATCCTCTAATGGTAGATTCAAGCAAACTGCTGTTGGCTATACAACTGCCCCTGTTGATATTTTTTCCCTAAATGAGGACGAAGCAGAAAAGAGAATGCTTGGTGCAGTTGCCTAG 1140 0.4719 MLRLCYGPLDCCFRRRGGADGLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAISNNVLYVANLGDSRAVLGRRDVERKNSPVVAQRLSTDHNVADAEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPVPLKRPVMTAEPSIIIRELESEDLFLIFASDGLWEQLSDEAAVQIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHAGSSNGRFKQTAVGYTTAPVDIFSLNEDEAEKRMLGAVA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02289 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Lapu7g02289 379 SMART PP2C_4 29 335 IPR001932 -
Lapu7g02289 379 SUPERFAMILY PP2C-like 44 339 IPR036457 -
Lapu7g02289 379 Gene3D - 26 346 IPR036457 -
Lapu7g02289 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
Lapu7g02289 379 PANTHER PROTEIN PHOSPHATASE 34 336 IPR015655 GO:0004722|GO:0006470
Lapu7g02289 379 CDD PP2Cc 48 337 IPR001932 -
Lapu7g02289 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Lapu7g02289 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02289 Lapu-Chr7 39183291 39186789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02289 17 344 PP2C-type Phosphatase Gene Family AT3G51370 57.440 4.15e-141 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02289 - K01102 gmx:100812137 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02289 7 39183291 39186789 Lapu7g02289 7 39183291 39186789 ECH
Lapu2g00520 2 4423751 4427732 Lapu7g02289 7 39183291 39186789 PCT