Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02288 ATGACGAGCGCTTCAGAGTTATTCCACACCAGAAGGCATCGATTGGGACGAAATGCTCTCGATCTAGGGTTCGATACTGAATTCCAAGCCGCCGATTCTCTCCACCGTCACCACCACGTCCGCCGCCTCCGTCACCACCCGGAGCGTGCATCTGATAGAGTCAACGGGAGGTATCGGCGGTCTTTCGTAAATGACAGCGTTGATTCTGAAGAAAATGTAAGAGGTAGTCTTGGAGGGAGTGCCAGTGAGAGACTACCCGTGGGTGTGGTTCTTGCAAGGGCCAGACTCCTTCAGAGGTTGAGAGGGGAACCTCTGTCTAGAAACAGGCAATATGGTAGAGATTCAGTAAGTGAGGATCGGGAAAGTGAATCATCGAATGAAGTTGCAACCGGGGCCACTCTAGTTACTGACTTGACTTCACAGATGGGAAGGTCCCAGTTCTTGCAGGAACTAAACAGAAAGCCACCTGGACTTACTCAGGAGGCCTTGAACTGTTTGGATCAGGAAGTTTTTAGCAGCAGCGAAATAGTATTGGAGTCCAGGGTAATGCAGGACTGTAGTATATGCTTGGAATCTTTCACAGATGGAGATGAGCTGATACGTTTGCCATGTGGGCATAAATTCCACTCTGTTTGCTTGGATCCATGGATTCGCTGCTGTGGAGACTGTCCATACTGTCGAAGACGTGTAGTTGTAAATACTCACTTACCATAG 714 0.4916 MTSASELFHTRRHRLGRNALDLGFDTEFQAADSLHRHHHVRRLRHHPERASDRVNGRYRRSFVNDSVDSEENVRGSLGGSASERLPVGVVLARARLLQRLRGEPLSRNRQYGRDSVSEDRESESSNEVATGATLVTDLTSQMGRSQFLQELNRKPPGLTQEALNCLDQEVFSSSEIVLESRVMQDCSICLESFTDGDELIRLPCGHKFHSVCLDPWIRCCGDCPYCRRRVVVNTHLP* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02288 237 PANTHER SI:CH211-59O9.10 32 232 - -
Lapu7g02288 237 Pfam Ring finger domain 185 227 IPR001841 -
Lapu7g02288 237 SUPERFAMILY RING/U-box 185 233 - -
Lapu7g02288 237 MobiDBLite consensus disorder prediction 107 125 - -
Lapu7g02288 237 MobiDBLite consensus disorder prediction 107 130 - -
Lapu7g02288 237 CDD RING-H2_PA-TM-RING 185 227 - -
Lapu7g02288 237 SMART ring_2 186 226 IPR001841 -
Lapu7g02288 237 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 232 IPR013083 -
Lapu7g02288 237 ProSiteProfiles Zinc finger RING-type profile. 186 227 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02288 Lapu-Chr7 39172783 39176008 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02288 1 231 C3H Transcription Factor Family AT1G49850 42.636 2.14e-46 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02288 7 39172783 39176008 Lapu7g02288 7 39172783 39176008 ECH