Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02285 ATGGGTGATGCACTAAATGAAGTGCAGCACAGGGGTGGTGTAGCTGCTGCTTCTCCGAAGAGGGACATTGCATTGTTTGAAGGAGACAAAGATTTTGAGCCGCACAATGGCATTGAATTTGAATCCCATGAAGCAGCATATTTATTTTATCAGGAATATGCCAAATCTATGGGATTCACTACTTCAATAAAAAACAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAATTTGCATGCTCTAGGTATGGTGTTACACCTGAGTCTGACAGTGGGAGCAGTCGAAGACCAAGTGTAAAGAAAACAGATTGCAAAGCTTGCATGCACGTGAAGAGGAAGCCAGATGGAAAGTGGATCATTCATGAATTTATAAAGGAACATAATCATGAACTTTTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAATTAGCTGAAAAGAATAATATTGATATCTTGCATGCTGTTAGTGAACGCACCAGAAAGATGTATGTTGAAATGTCAAGGCAATCTGGAGGCTGTCAAAACATCGGGTCTTTCTTGAGTGATATAAACTATCAGTTTGATAGAGGCCAATATTTGGCTTTGGATGAGGGAGATGCCCAAATTATGCTCGAGTATTTTAAGCATGTACAAAAGGAGAGTCCCAACTTCTTCTATTCTATTGATTTAAATGAAGAGCAGCGCTTAAGAAATCTATTTTGGATTGATGCAAAAAGTATCAATGATTATCTCAGCTTTAATGATGTAGTTTCATTTGATACCACTTACATTAAAAGCAATGACAAGTTGCCTTTTGCTCCTTTTGTTGGAGTGAACCACCACTCTCAACCTATATTGCTTGGTTGCGCATTGATTGCAGATGAGACTAAACCAACATTTGTTTGGTTAATGAAGACATGGCTTAGAGCTATGGGTGGGCTAGCTCCCAAGGTTATAATCACTGATCAAGACAAAGCCTTGAAGGCAGCAATTGAAGAAGTCTTTCCAAATGTACGACATTGTTTTTCTCTTTGCCACATACTGGAGAGGATACCAGAAAATCTCTCTTTTGTGATCAAACAGCACAACAACTTCTTACCAAAGTTTAACAAGTGCATTTTTAAATCCTGGACAGATGAACAGTTTGACATGAGATGGTGGAAAATGGTCAGTATATGTGAACTGCAAGATGATATATGGTTTCAGTCACTGTATGAGGACCGGAAAAAGTGGGTGCCAACTTACATGGGGGATACCTTTTTAGCTGGGATGTCTACACCTCAGCGCTCTGAAAGTACGAACTCTTTCTTTGACAAATATATTCATAAGAAAATTACCCTTAAAGAGTTTGTAAAACAATATGGGATAATTCTTCAGAATAGGTATGATGAGGAAGCCATTGCGGATTTTGAATCATTGCACAAACAGCCAGCACTTAAATCTCCTTCACCTTGGGAAAAGCAAATGTCAACAGTTTATACGCATGCAATATTTAAGAAATTTCAAGTTGAAGTTTTGGGTGTAGCTGGATGTCAATCTAGGATTGAGGTTGGAGATGGAACTGTTGCAAAGTTTATAGTTCAAGATTATGAGAAGAATGAAGAGTTTTTGGTAACTTGGAACGAAATGAGCTCGGAGGTCTCTTGCTTTTGTCGATTGTTTGAATATAAAGGTTTCCTTTGCAGGCATGCTTTGAGTGTTCTCCAACGTTGTGGTTGTTCAAGTGTTCCATCTCATTATATCTTGAAGAGGTGGACGAAAGATGCCAAAATTAAGGAATCAATGGCAGATAGGACAAGAAGGATACAAACTAGGGTGCAACGTTATAATGACTTGTGTAAACGAGCTATCGATTTGAGTGAAGAAGGATCATTATCTGAAGAGAATTACAATGTTGTTTTTCGTGCACTTGTTGATGCCTTGAAGAACTGTGTACTCGTGAATAATTCTAATAACAACGGTGCAGAAACTAGCAACAATGCCTATGGCCTTCGTGAAGCAGAAGAAATTCAGGGTCCTCTTGCTTTGAAACCTAATAAAAAGAGGAACGCAGCTAGGAAAAGAAAGGCACAATTAGAGCAGGATGTTATACTTGTTAATGCTCAAGATAGCCTGCAGCAAATGGATAATCTTAGCTCGGATGCAATGGCCCTTAATGGATATTATGGTACCCAGCAAAATGTGCAAGGACTGCAGGTACAATTGAACTTAATGGAGCCGCCTCATGATGGTTACTATGTTAATCAACAGAGCATGCAAGGCCTGGGTCCTTTGAATTCCATGGCTCCAAGCCATGATGGTTTTTTTGGAACACAGCAAAGCATTCATGGGCTGGGAGGGCAATTGGAATTTCGTCCAGCAACAACTTTTGGATATAGCCTTCAGGATGAACCTGATCCCCAGTTTCATGGCAACAGTTCAAGAAATACTTAG 2430 0.3922 MGDALNEVQHRGGVAAASPKRDIALFEGDKDFEPHNGIEFESHEAAYLFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRKPDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCQNIGSFLSDINYQFDRGQYLALDEGDAQIMLEYFKHVQKESPNFFYSIDLNEEQRLRNLFWIDAKSINDYLSFNDVVSFDTTYIKSNDKLPFAPFVGVNHHSQPILLGCALIADETKPTFVWLMKTWLRAMGGLAPKVIITDQDKALKAAIEEVFPNVRHCFSLCHILERIPENLSFVIKQHNNFLPKFNKCIFKSWTDEQFDMRWWKMVSICELQDDIWFQSLYEDRKKWVPTYMGDTFLAGMSTPQRSESTNSFFDKYIHKKITLKEFVKQYGIILQNRYDEEAIADFESLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRIEVGDGTVAKFIVQDYEKNEEFLVTWNEMSSEVSCFCRLFEYKGFLCRHALSVLQRCGCSSVPSHYILKRWTKDAKIKESMADRTRRIQTRVQRYNDLCKRAIDLSEEGSLSEENYNVVFRALVDALKNCVLVNNSNNNGAETSNNAYGLREAEEIQGPLALKPNKKRNAARKRKAQLEQDVILVNAQDSLQQMDNLSSDAMALNGYYGTQQNVQGLQVQLNLMEPPHDGYYVNQQSMQGLGPLNSMAPSHDGFFGTQQSIHGLGGQLEFRPATTFGYSLQDEPDPQFHGNSSRNT* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02285 809 Pfam MULE transposase domain 255 348 IPR018289 -
Lapu7g02285 809 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Lapu7g02285 809 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 644 IPR031052 GO:0006355
Lapu7g02285 809 Coils Coil 681 701 - -
Lapu7g02285 809 MobiDBLite consensus disorder prediction 790 809 - -
Lapu7g02285 809 Pfam SWIM zinc finger 545 570 IPR007527 GO:0008270
Lapu7g02285 809 SMART 26again6 546 573 IPR006564 GO:0008270
Lapu7g02285 809 Pfam FAR1 DNA-binding domain 49 135 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02285 Lapu-Chr7 39153395 39158564 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lapu7g02285 MULE 4.9e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02285 - - gmx:100805377 1532.31