Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02278 ATGGGACACTCCAACGTTTGGAACTCTCACCCGAAAAACTATGGTCCTGGTTCTCGCACTTGCCGTGTCTGTGGAAACCCACATGGATTGATCAGGAAGTATGGCCTTATGTGCTGCAGGCAGTGCTTCCGTAGCAATGCCAAGGAAATTGGCTTCATCAAGGTATATACAATCGGATGTGATATTCCCAATTTTAGTAACTAA 204 0.4559 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVYTIGCDIPNFSN* 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02278 67 Hamap 30S ribosomal protein S14 type Z [rpsZ]. 2 57 IPR023676 GO:0003723|GO:0003735|GO:0006412|GO:0015935
Lapu7g02278 67 FunFam 40S ribosomal protein S29 1 56 - -
Lapu7g02278 67 PANTHER 40S RIBOSOMAL PROTEIN S29 1 55 IPR039744 GO:0003735|GO:0008270
Lapu7g02278 67 Gene3D 30s Ribosomal Protein S14; Chain N 1 55 IPR043140 -
Lapu7g02278 67 Pfam Ribosomal protein S14p/S29e 7 54 IPR001209 GO:0003735|GO:0005840|GO:0006412
Lapu7g02278 67 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 13 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02278 Lapu-Chr7 39126568 39127589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02278 1 54 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.593 7.21e-33 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02278 K02980 - pop:7497336 127.102