Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02274 ATGAGCTGCAATGGTTGTCGTGTACTCAGAAAGGGTTGCAGTGAGGACTGCATGCTACGACATTGCCTACTATGGATAGAGAATCCACAGGCCCAAGCTCACGCCACCCTCTTTGTGGCCAAGTTCTTTGGCCGTGCCGCTCTCATGTCTTTCCTTTCCGCCGTACCCGCCAACCAAAGATCCGCTTTGTTTCAGTCACTGCTTTATGAAGCAGTGGGGCGTACTATAAATCCAGTGAATGGAGCAGTGGGGCTGTTGTGGACTGGGAACTGGCACCTGTGCCAAATGGGTGTGGAGAAAGTGCTCCGAGGTGGTGCTGCGTTGACCCCACTCCCTCACTTCTTGAGTAGTGTGGATGTAGATCAACAACGCCATGTAACTGAGAGAGTGATGGTTGGAGGTGGAATATTGTGTCACCAGGCAAAGAAGCAACGTGTGGGGACACCCTCTCAGGAATCTGAGACCTCCTATTTGGGACGTAGACCACAGGATTGTGCTCCTCAAAGTCAAAGGAACCTCCTTACACTATTCTTCTGA 537 0.514 MSCNGCRVLRKGCSEDCMLRHCLLWIENPQAQAHATLFVAKFFGRAALMSFLSAVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWHLCQMGVEKVLRGGAALTPLPHFLSSVDVDQQRHVTERVMVGGGILCHQAKKQRVGTPSQESETSYLGRRPQDCAPQSQRNLLTLFF* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02274 178 MobiDBLite consensus disorder prediction 143 165 - -
Lapu7g02274 178 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Lapu7g02274 178 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Lapu7g02274 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 141 - -
Lapu7g02274 178 MobiDBLite consensus disorder prediction 144 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02274 Lapu-Chr7 39102539 39104304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02274 1 116 AS2 family AT3G49940 75.000 2.82e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu7g02274 LOB 7.4e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02274 7 39102539 39104304 Lapu7g02274 7 39102539 39104304 ECH
Lapu2g00503 2 4314435 4315235 Lapu7g02274 7 39102539 39104304 PCT