Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02268 ATGGAATCTTCTCAACAGATTTCTGAAGAATGGGGTTCTCTTTGTGGATTGCACGCTATTGAAGAAGCTGACTTTATGGCTCAGTTGTTTGGGGGTACTGACTATTCTGTCACAGAAAAGCACTATGGAAATACCACTTTTGGCTTTTGGCCTGGCCATGAATCCACAACAGTGACCATGAAAGGCACTGATAGCAACTCATACTTCCTTTCAAATGTTACAGACATTAATTTATGTTTCTCACAAGGGAGTAGCTCCAGCATTGACAGTGGTAACAGTATCTTTTCCACTACAAGTAGTGGACCCTACTCCTGTGCTCCAGCAACAAACTTTGACTCTCTGTCCATGGCCTTTTTCCTTGGAGATTCCCAATTTAGTCCCCATAGTTTTCAGTGTAATGACAACTCGAGCCAACAGATAAATGAAAACACTGATGAAGAGTCAAGTCTAGACCCAGTAGCTCTTGCTGACAACAATTTGCAGGCTAAGAGGGAGCATGAGATGATGGTTTCTGAACATGAACAAGAGGACAGAAGCGCAAACCTGGAGAACCTGACAAAAAGACTTAGGAGTTCAAAAGAGGTCTCAAAAACATTGAGGAATGCTAAGTTGAAGAAAAATTCGAAATCTGCTTCAATGAGAAAGGATGAAGATGACAGAAGCTTGAACCTCCAAAGGCATGGCTGTTTTTCACAGGGTGACTCTAATGCTTCTTTGAAGCCAAATGGAGGGGCATCGAAAGATCCTGCACCTCCCAAATTGCTTAGAAAATCAAGAGCAACTAACGGTCCAGCCACTGATCCACAGAGCCTTTATGCAAGAAAGAGAAGAGAAAGAATAAATGAAAGGTTGAGAATACTGCAAAGTCTTGTCCCCAACGGAACTAAGGTGGATATCAGCACCATGCTTGATGAAGCAGTGCAATACGTTAAGTTTTTACAACTCCAAATTAAGCTTCTGAGCTCTGACGATACGTGGATGTATGCCCCAATTGCTTACAATGCTGACTTCATGAGCCAGTTGCTTGGCAACTGCTCACTCCCTGAAAATCTGTGTGGAAATTTCCATTTGGGAATTCCATCTTCGTCATGGCCTGGCCATGAATCAACAATAGTGACCGTGACAAGCATCAATGACAGTCCATATTTACCTACAAACGCTTATAATAGCAATAGTAATTATTTATGTTTTTCACAAGGAAGTAGCTCCACTTCTGATAGTAGCAATATATTTCCTACTACAAGTGGTAATAAACACTGCTTGAATGACCCAGTAGCCAACATTGGCTACATGTCCATGGGTTTTGCCAAGTTCAGCCCATATAATGTACAAGGAAGTGACGGCCAACAGATGAATGAAAGCACTGATCAGGAGTTAGGTCTAGAGGTTATTGCAGACAAGAATTCGCAGGATCACCATGAATGTGAAGTACTAGTTTCTGAAGCAGCCAAAGAGGATATACCCACCAATCTGGAGAAGTCAGGAAAAAGATCTAGGGGCTCAATGCAGGTACGAAAGAGCAAGAAAAATGCTAAATCCGTGAAGAAACCAAAATCTGATTCTATAAGTAACTCTGAAGAGGGTAGAAGTCCTGATCTTCAGGGTTGCTGCTCAGAGGATGATGACTCCAATGCTTCTCAGGAGCTAAATGGAGGAGGATCTTCGAGTTTGAGCCTGGAGGATTCTACATCTCTTAAGTTGAAGGGGAGAAAACCAACTGCTAATAGAGGTTCTGCTACTGATCCACAAAGTGTATATGCAAGGAGAAGAAGGGAAAGAATAAATGAAAGATTGAAAGTCCTACAAAACCTTGTCCCTAATGGAACCAAGGTGGATATCAGCACCATGCTTGAGGAAGCTGTTCAATATGTGAAGTTCTTACAGCTCCAAATTAAGCTTCTGAGCTCTGATGATCTGTGGATGTACGCTCCTATTGCTTACAATGGAATGAACATTGGACTAGACCTCAATATTACCCCAACCAAACAGCCATAA 1995 0.4201 MESSQQISEEWGSLCGLHAIEEADFMAQLFGGTDYSVTEKHYGNTTFGFWPGHESTTVTMKGTDSNSYFLSNVTDINLCFSQGSSSSIDSGNSIFSTTSSGPYSCAPATNFDSLSMAFFLGDSQFSPHSFQCNDNSSQQINENTDEESSLDPVALADNNLQAKREHEMMVSEHEQEDRSANLENLTKRLRSSKEVSKTLRNAKLKKNSKSASMRKDEDDRSLNLQRHGCFSQGDSNASLKPNGGASKDPAPPKLLRKSRATNGPATDPQSLYARKRRERINERLRILQSLVPNGTKVDISTMLDEAVQYVKFLQLQIKLLSSDDTWMYAPIAYNADFMSQLLGNCSLPENLCGNFHLGIPSSSWPGHESTIVTVTSINDSPYLPTNAYNSNSNYLCFSQGSSSTSDSSNIFPTTSGNKHCLNDPVANIGYMSMGFAKFSPYNVQGSDGQQMNESTDQELGLEVIADKNSQDHHECEVLVSEAAKEDIPTNLEKSGKRSRGSMQVRKSKKNAKSVKKPKSDSISNSEEGRSPDLQGCCSEDDDSNASQELNGGGSSSLSLEDSTSLKLKGRKPTANRGSATDPQSVYARRRRERINERLKVLQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLNITPTKQP* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02268 664 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 427 636 IPR045843 GO:0003700|GO:0006355
Lapu7g02268 664 CDD bHLH_AtIND_like 265 327 - -
Lapu7g02268 664 MobiDBLite consensus disorder prediction 526 563 - -
Lapu7g02268 664 Coils Coil 182 202 - -
Lapu7g02268 664 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 577 643 IPR036638 GO:0046983
Lapu7g02268 664 CDD bHLH_AtIND_like 579 641 - -
Lapu7g02268 664 Gene3D - 268 322 IPR036638 GO:0046983
Lapu7g02268 664 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 264 313 IPR011598 GO:0046983
Lapu7g02268 664 MobiDBLite consensus disorder prediction 486 587 - -
Lapu7g02268 664 MobiDBLite consensus disorder prediction 130 152 - -
Lapu7g02268 664 Pfam Helix-loop-helix DNA-binding domain 588 628 IPR011598 GO:0046983
Lapu7g02268 664 Pfam Helix-loop-helix DNA-binding domain 274 314 IPR011598 GO:0046983
Lapu7g02268 664 SMART finulus 270 319 IPR011598 GO:0046983
Lapu7g02268 664 SMART finulus 584 633 IPR011598 GO:0046983
Lapu7g02268 664 MobiDBLite consensus disorder prediction 166 201 - -
Lapu7g02268 664 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 578 627 IPR011598 GO:0046983
Lapu7g02268 664 MobiDBLite consensus disorder prediction 225 242 - -
Lapu7g02268 664 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 267 329 IPR036638 GO:0046983
Lapu7g02268 664 MobiDBLite consensus disorder prediction 209 224 - -
Lapu7g02268 664 Gene3D - 579 635 IPR036638 GO:0046983
Lapu7g02268 664 FunFam Basic helix-loop-helix transcription factor 579 636 - -
Lapu7g02268 664 MobiDBLite consensus disorder prediction 166 275 - -
Lapu7g02268 664 MobiDBLite consensus disorder prediction 130 148 - -
Lapu7g02268 664 FunFam Basic helix-loop-helix transcription factor 265 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02268 Lapu-Chr7 39046147 39052579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02268 335 658 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 38.592 2.46e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g02268 HLH 9.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02268 - - gmx:100817334 544.658