Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02239 ATGTCCGATAACACCAAAGGAAAAAGCAACACATCTACTATCGCCATAGCAGTATCGGTACCAGTTTTTGCTGCTGTGGTGTTGACTTTTATCTACTTCTGTCTAAGATGGAGGAAGCCATGGGAATTGTTTAAAACTCCGCAAGAAGAACACGGTGATCAAATTGACATTTCTGGAATATTGCGCTTCAGATTTAACACCATACGAGATGCTACAGATGACTTTTCCCGCTCTAATAAAGGTAGGCTTTTCGATGAACAAGAGGTTGCTGTCAAAAGGTTGTCAAGTTCTGAACAAGGAAATGAAGAATTCAGGAATGAAGTGCTTTTAGCGGCCAAGCTTCAGCACCCAAACATAGTTAAGCTGCTTGGTTTCTGTATGGAAGGATTAGAAAGGCTACTTGTCTATGAATTTGTTCCAAATAAAAGCCTTGATTACTTCATATTTGGTAAGTTCAATTTAAATGTATGTTTAATTGAACCATACCTCTAA 492 0.3841 MSDNTKGKSNTSTIAIAVSVPVFAAVVLTFIYFCLRWRKPWELFKTPQEEHGDQIDISGILRFRFNTIRDATDDFSRSNKGRLFDEQEVAVKRLSSSEQGNEEFRNEVLLAAKLQHPNIVKLLGFCMEGLERLLVYEFVPNKSLDYFIFGKFNLNVCLIEPYL* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02239 163 ProSiteProfiles Protein kinase domain profile. 54 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02239 163 Gene3D Phosphorylase Kinase; domain 1 43 138 - -
Lapu7g02239 163 Pfam Protein tyrosine and serine/threonine kinase 85 148 IPR001245 GO:0004672|GO:0006468
Lapu7g02239 163 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 13 149 - -
Lapu7g02239 163 SUPERFAMILY Protein kinase-like (PK-like) 56 152 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02239 Lapu-Chr7 38749715 38751152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02239 2 149 Receptor kinase-like Gene Family AT4G05200 45.342 3.99e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02239 PK_Tyr_Ser-Thr 1.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02239 - - gmx:113000774 179.874