Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02236 ATGCTGCGCTACTCCGACCGCACCATAACGGGCCTCGAAGAAATTGGGCCTGCTTACTTTGTGTGGAACCTCAACGACGCACCCAACGCCGACCAGTTCAATCGAGTGGTGAAGAAGCTTCTGGATGGCCTCAGAGACACGGCGGCGTCGCGTGACAGTGGTAAGAAATATGCGGTGTCGACTGCGACGGGCCCAGATGAGCAAGTGATATATGGGCTTGCGCAGTGCACCCCTGATTTGAGTGGGCCTCAGTGCCTTGACTGCTTGGTCCAGTCCATAGCTGAACTCCCACGGTGCTGTAATAATAGAATAGGAGCAAGAATTATTAGACCTAACTGTTATGTGAGAGGCGATCTTAAGCCCGATGAGTGCCTTAAATCCCTCAACGATTCCAGAGTGTCTCTGGCACAGCGTTGTCCAAACCAGAAGGAGGCTATTTGGTGGACGGTGGAGTGCATGTTGCGCTACACTAACCGCTCCATATTTGGTGTCATGGAAAACCAACCTACGAATGATAACTATTACGATTTGAATGTAACCGGTTCGGTGGAACAATTCAAAGCAGCTCTGGAGAGCCTGATGAGGAATCTAACGGCCATAGCTGCATCAGGTGACTCTCGCCGTAAGTATGCTACAGGCAGTACTCCTGCTCCAGATTTCCAAACCATATACGGTCAAGCACAGTGTACTCCTGATTTGTCATCCGAAGATTGCACTAAGTGCTTGAATGAAGCTATCTCAATTATCCCAAAGTGTTGTAGTGGCAAGGCTGGAGGCAATGTTGTAAAACCCAGTTGTAGAATTAGGTTTGATCCCTACCCCTTCTATGGGCCTACGCTCAAATTAGACCCTGATGCACCACCACCACCCTCCACCAACAACACTTCTTCTTCACAAGTTGAAAGAGAAGAAGAAAGTGATGAAGATGAAATTGCATTTACTGAGTCATTGCAATACAACTTCAACACCATACGTGTTGCTACAAATGAATTCGCTGATTCTAATAAACTTGGACAAGGCGGAATGGCTGCAATTTTCTTTCTCTTTTGTCTCTGTGTCATCATAATCATATCGCAAGCCGGCGCTCAGACATCGTGTGATAACACCAAAGGCAACTACACAGTCAACAGCACTTATCACAACAACCTCAACACCCTTTTATCCAGTTTCTCTACCCACGCCGAAGTCAACTACGGTTTCTACAATTTCTCACATGGCCAAGGCACAGACAAAGCATACGCCATCGGGGTCTGTAGAGGCGATCGTACACCCGATCAATGCCTCCAATGCCTCAACGATTCCAGAGTGTCTCTCGCAAAGGAGTGTCCCAACCAGAAAGAGGCAATTCGGTGGGTTGGTGAATGCACCTTGCGCTACTCTAACCGCTCCATATTTGGCCTCATGGAGAATCAACCTACTGTGGAACTCTTGTACACCTTGGAGGTAAGGGGTTCGGTGGAGCAATTCAACGCAGCGCTCCAAAGCTTGATGAGGAATCTAACACGCACAGCTGCGTCCGGTGACTCTCGTCGCAAGTATGCTACAGGCAGTGCACCTGCTCCAGAATTTCAAACCATATACGGTTACACGCAGTGCACGCCTGATTTGTCATCCGAAGATTGCTCCAAGTGTTTGAATGAAGCTATCTCAAAAATCCCAGACTGCTGTACTGGCAAGGCTGGAGGCAATGTCTTGAAGCCCAGTTGTAGAATTAGATTTGACCCTTATATCTTCTATGGACCTACACTCAAGTTAGACCCAGATGCACCACCACCAACATCCACCCCACCACCCTCTCGCTTCGCCAACAACACTTTCTTACATTCTCAAGGAAAGAACAACACGTCACGAACTATCATCGTCATAGCAGTGCCAGTTGCTACTGTTGTTTTAGCGCTCAGTCTTTTCTGCATATATCTGTCAGTGAGGAAGCCCAGAAAAAAACTTGAAAGTAAAAGAGAAGAAGATGGTGATGAGGAAGATGAAGTTACATTTGCTGAGTCATTGCTATTCAATTTTGAAACCATCCGAGTTGCTACAAATGAATTCGCTGATTCTAATAAACTTGGACAAGGCGGGTTTGGAGCTGTTTACAGAGGTCGGCTTTCCAATGGACAAGTAATTGCTGTGAAAAGGTTGTCAAGTGATTCTGGGCAAGGAGATACGGAATTCAAGAATGAAGTGCTTTTATTGGCCAAGCTTCAACACCGAAATTTAGTTAGGCTAATTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTGCTTATCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCCAATAAAGAAAACACAGTTGGATTGGCAAATGCGCTACAAAATCATTAAAGGTATTGCAAGAGGAATTCTCTATCTCCACGAGGATTCTCAATTAAGAATTATACATCGAGATCTTAAGGCAAGCAACGTTCTCTTGGATGAAAACATGTATCCTAAGATATCCGATTTTGGTATGGCGAGATTGGTTCAGGTTGATCAGACTCAAGCAAATACACATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATATATGGTCAGTTTTCAACAAAATCAGATGTTTTTAGTTATGGTATACTGGTTCTTGAGGTTGTAAGTGGCCAAAAAAGCATTGGTTCTCGTCATGGGGAGCACGTGGAGGATCTATTGAGCATTACATGGCGAAACTGGAAGGTTGGAACAGCTACAAATATTGTAGACCCCACATTAATGAACGGTTCGCGAAATGAAATGATTAGATGTATCCACATTGGGTTACTGTGTGTTCAAGAAAATGTAGCTGCCAGACCAACCATGGCTTCTGTTGTACTCATGCTTAATAGTCATTCTCTCTCCCTCCCAGTACCTTCAGAACCTGCATTTGTTGTGAATAGTAGCACAAGAAGCTTTTCAAACATGTGGCCGGGGGAGCATAATTCAAGGGAAACAGGATCGACAGAATCCACAAATAAATCAGCTCAATATTCGGTAAATGAGGCTTCAATTACTGAGCCGTACCCTCGCTAG 3048 0.4495 MLRYSDRTITGLEEIGPAYFVWNLNDAPNADQFNRVVKKLLDGLRDTAASRDSGKKYAVSTATGPDEQVIYGLAQCTPDLSGPQCLDCLVQSIAELPRCCNNRIGARIIRPNCYVRGDLKPDECLKSLNDSRVSLAQRCPNQKEAIWWTVECMLRYTNRSIFGVMENQPTNDNYYDLNVTGSVEQFKAALESLMRNLTAIAASGDSRRKYATGSTPAPDFQTIYGQAQCTPDLSSEDCTKCLNEAISIIPKCCSGKAGGNVVKPSCRIRFDPYPFYGPTLKLDPDAPPPPSTNNTSSSQVEREEESDEDEIAFTESLQYNFNTIRVATNEFADSNKLGQGGMAAIFFLFCLCVIIIISQAGAQTSCDNTKGNYTVNSTYHNNLNTLLSSFSTHAEVNYGFYNFSHGQGTDKAYAIGVCRGDRTPDQCLQCLNDSRVSLAKECPNQKEAIRWVGECTLRYSNRSIFGLMENQPTVELLYTLEVRGSVEQFNAALQSLMRNLTRTAASGDSRRKYATGSAPAPEFQTIYGYTQCTPDLSSEDCSKCLNEAISKIPDCCTGKAGGNVLKPSCRIRFDPYIFYGPTLKLDPDAPPPTSTPPPSRFANNTFLHSQGKNNTSRTIIVIAVPVATVVLALSLFCIYLSVRKPRKKLESKREEDGDEEDEVTFAESLLFNFETIRVATNEFADSNKLGQGGFGAVYRGRLSNGQVIAVKRLSSDSGQGDTEFKNEVLLLAKLQHRNLVRLIGFCLEGRERLLIYEFVPNKSLDYFIFDPIKKTQLDWQMRYKIIKGIARGILYLHEDSQLRIIHRDLKASNVLLDENMYPKISDFGMARLVQVDQTQANTHRIVGTYGYMAPEYAIYGQFSTKSDVFSYGILVLEVVSGQKSIGSRHGEHVEDLLSITWRNWKVGTATNIVDPTLMNGSRNEMIRCIHIGLLCVQENVAARPTMASVVLMLNSHSLSLPVPSEPAFVVNSSTRSFSNMWPGEHNSRETGSTESTNKSAQYSVNEASITEPYPR* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02236 1015 Gene3D - 169 275 IPR038408 -
Lapu7g02236 1015 Gene3D - 18 116 IPR038408 -
Lapu7g02236 1015 Gene3D - 478 578 IPR038408 -
Lapu7g02236 1015 Gene3D - 117 160 IPR038408 -
Lapu7g02236 1015 Gene3D - 360 463 IPR038408 -
Lapu7g02236 1015 Pfam Protein tyrosine and serine/threonine kinase 687 950 IPR001245 GO:0004672|GO:0006468
Lapu7g02236 1015 SMART serkin_6 683 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02236 1015 MobiDBLite consensus disorder prediction 979 1015 - -
Lapu7g02236 1015 Gene3D Phosphorylase Kinase; domain 1 645 758 - -
Lapu7g02236 1015 Pfam Salt stress response/antifungal 487 574 IPR002902 -
Lapu7g02236 1015 Pfam Salt stress response/antifungal 183 271 IPR002902 -
Lapu7g02236 1015 Pfam Salt stress response/antifungal 366 461 IPR002902 -
Lapu7g02236 1015 Pfam Salt stress response/antifungal 29 116 IPR002902 -
Lapu7g02236 1015 SUPERFAMILY Protein kinase-like (PK-like) 668 982 IPR011009 -
Lapu7g02236 1015 FunFam Cysteine-rich receptor-like protein kinase 10 171 275 - -
Lapu7g02236 1015 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524
Lapu7g02236 1015 Gene3D Transferase(Phosphotransferase) domain 1 759 960 - -
Lapu7g02236 1015 ProSiteProfiles Gnk2-homologous domain profile. 15 122 IPR002902 -
Lapu7g02236 1015 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 364 1013 - -
Lapu7g02236 1015 ProSiteProfiles Gnk2-homologous domain profile. 167 275 IPR002902 -
Lapu7g02236 1015 ProSiteProfiles Gnk2-homologous domain profile. 471 578 IPR002902 -
Lapu7g02236 1015 FunFam Cysteine-rich receptor-like protein kinase 10 474 578 - -
Lapu7g02236 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Lapu7g02236 1015 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 359 464 - -
Lapu7g02236 1015 MobiDBLite consensus disorder prediction 279 309 - -
Lapu7g02236 1015 FunFam cysteine-rich receptor-like protein kinase 10 759 960 - -
Lapu7g02236 1015 FunFam Cysteine-rich receptor-like protein kinase 10 644 758 - -
Lapu7g02236 1015 ProSiteProfiles Gnk2-homologous domain profile. 361 464 IPR002902 -
Lapu7g02236 1015 FunFam Cysteine-rich receptor-like protein kinase 10 17 118 - -
Lapu7g02236 1015 ProSiteProfiles Protein kinase domain profile. 683 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02236 1015 MobiDBLite consensus disorder prediction 979 1008 - -
Lapu7g02236 1015 CDD STKc_IRAK 689 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02236 Lapu-Chr7 38709382 38728899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02236 116 302 Receptor kinase-like Gene Family AT4G21410 35.450 8.17e-33 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02236 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02236 - - gmx:100791582 1033.09