Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02234 ATGATAGCAGTCAAAAGGTTGTCAAGAGAATCCAACCAAGGAGACACAGAATTTAGGAATGAAGTGCTTTTAGTGGCTAAGCTTCAGCACCGAAATTTAGTTAGGCTACTGGGTTTCTGCTTGGAAGGAAGAGAAAGGCTACTCGTCTATGAATTTGTTCCTAACAAAAGCCTTGATTATTTCATATTTGATCCAGCCAAGAAAGCACAATTGGATTGGGAAATGCGGTACAAAATCATTAGAGGTATTGCTCGAGGTATTCTCTACCTTCACGAAGATTCTCAACTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGACGAAGAGATGAATCCAAAGATTGCTGATTTTGGCATGGCAAGACTGGTTTTAGTGGATCAAACTCAAGCAAATACAAATAGAGTTGTCGGAACCTATGGATACATGGCACCGGAGTATATAATGCAAGGACAATTTTCTGTGAAATCAGATATCTTCAGTTTTGGTGTGCTGCTTCTTGAGATCGTAAGTGGCCAGAAAAACAGCGGCATTCGTCATGGGGAGAAAATAGAGGATCTACTGAGCTTCACATGGAGAAACTGGAGGGAGGGGACAGCTGTAAACATTGTAGATCCATCATTAAACAACAATTCGCGAAATGAAATGATGAGATGCATCCATATTGGTTTGCTCTGTGTTCAAGAAAATTTAACTGACAGACCAACAATGGCGACCATTATGCTCATGCTCAATAGCTATTCTCTCAGTCTCCCCATTCCTTCTGAACCTGCATTTTATGTGAACAGTGGAACTAGAAGCCTTCCAGCGACGCTGTCATGGGGGCATAGTTCAAGGGCAACAACAAACAAATCTGGTCAAGAGTCAGAAAATGAGAATTCAATTACTGAGCTGTACCCTCGCTAG 915 0.4131 MIAVKRLSRESNQGDTEFRNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPAKKAQLDWEMRYKIIRGIARGILYLHEDSQLRIIHRDLKASNILLDEEMNPKIADFGMARLVLVDQTQANTNRVVGTYGYMAPEYIMQGQFSVKSDIFSFGVLLLEIVSGQKNSGIRHGEKIEDLLSFTWRNWREGTAVNIVDPSLNNNSRNEMMRCIHIGLLCVQENLTDRPTMATIMLMLNSYSLSLPIPSEPAFYVNSGTRSLPATLSWGHSSRATTNKSGQESENENSITELYPR* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02234 304 PIRSF ILK 1 256 - -
Lapu7g02234 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Lapu7g02234 304 CDD STKc_IRAK 2 248 - -
Lapu7g02234 304 Gene3D Phosphorylase Kinase; domain 1 1 52 - -
Lapu7g02234 304 ProSiteProfiles Protein kinase domain profile. 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02234 304 MobiDBLite consensus disorder prediction 275 304 - -
Lapu7g02234 304 SMART serkin_6 1 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02234 304 Gene3D Transferase(Phosphotransferase) domain 1 53 254 - -
Lapu7g02234 304 Pfam Protein tyrosine and serine/threonine kinase 2 245 IPR001245 GO:0004672|GO:0006468
Lapu7g02234 304 FunFam cysteine-rich receptor-like protein kinase 10 53 254 - -
Lapu7g02234 304 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 286 - -
Lapu7g02234 304 SUPERFAMILY Protein kinase-like (PK-like) 2 274 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02234 Lapu-Chr7 38709031 38712037 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02234 2 304 Receptor kinase-like Gene Family AT4G38830 61.238 1.40e-132 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02234 PK_Tyr_Ser-Thr 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02234 - - var:108324785 552.362