Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02233 ATGATCATACGCAAAGCTTCAGTTAACGTTGTTCGTTATTCTGATTATGGGATGGGTGCCGTTTCTTGCATGCTTCTTTTCTTTCTCTGCTGTCTAGTATCTCAAGCCAGCGCGCAGTATCTCTTTCAATCCTGTGATAACAACAACGGGAACTACACAGCCAATAGCACCTATAACACCAATCTCAACACCCTTTTATCCACTCTTTCTTCCAACACAGAAATCAACTATGGTTTCTACAACTTCTCTCAAGGTCAAAACGCAGACAGAGTCAACGCCATTGGCCTGTGCAGGGGAGATGTGGAGCCAAATGAGTGCCGCAGTTGCCTCAAAGATGCCGGAGGCAATATCACACAGGTTTGTCCAAACCAGAAAGAGGCTCTTATATATAATGACAACTGCATTTTGCGCTACTCAAACCGCTCAATATTTGGGGTCTCGGAAATTTCTCCTGTTTTTTATATGTGGAACGCAAACAATGCAACAGAAGCGGTGGAGTTCAATGAAGTGCTCCAAACCTTGATGAGGGGTCTCAGAGACAGAGCAGCATCGGGTGACTCTCGTCGTAAGTATGCTACGGATAATACAACAACTAGCAATTTTCAAGCCATATATGGTCTTGTGCAGTGCACCCCTGATTTGACTCAGACAGAGTGCAATGATTGTTTGGATGACGCTATCCCACAAATCCGAACTTGCTGCAACGACAAGAGAGGTGGTAGAGTTGTTCTACCCAGTTGTAACATAAGATATGAAGACTACCGCTTCTACGAACAGACCACGATAATAGACCCACAGACACCACCATCCACAAGTAACACTTCCCCGGAAGAAAGTAGCAACACAACAGTAATTGTCATTGCCGTAATTGTGCCTACTGTTCTTCTTGTTTTGCTCATTTGTCTCTTCCTGTATTTGAGGAGGAGGAGGGCAAGGAAAAATCTTGCAGGCAAGTCCATTAAAAAAGAAGAACAAGATGTAGATGAGGATGAAATTAAAATTGCTGAATCATTGCAATTCGACTTTGACACAATACGAGTTGCTACAGAAGACTTCTCTCATTCTAATAAACTTGGACAAGGTGGATTTGGAGCAGTTTACTGGGGTAGGCTCTCCAATGGACAGATAATTGCTGTCAAAAGGTTGTCAAGAGATTCTGGGCAAGGAGATACGGAATTTAAGAATGAAGTGCTTTTAGTGGTGAAGCTTCAGCACCGAAATTTAGTTAGGCTACTTGGCTTCTGCTTGGAAGGAAGAGAAAGATTACTTGTCTATGAATTTGTTCCCAATAAAAGCCTTGATTATTTCATATTTGATCCAGCCATGAAAGCACGAATGGATTGGGATAAGCGCTACAGAATCATTAGAGGCATTGCTCGAGGTCTTCTCTACCTTCACGAAGATTCTCAACTACGAATTATCCATCGAGATCTCAAAGCAAGCAACATTCTCTTAGACGAAGAAATGAATCCTAAGATTGCAGATTTTGGCATGGCAAGACTGGTTTTAATAGATCAAACTCAAGCAAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCGGAGTATGCAATGCGTGGACACTTTTCAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTAATAATGGGGAGAATATGGAGGATCTACTAAGCTTCGCTTGGAGAAACTGGAAGGAAGGGAAGGCTATAAATATTGTAGATCCATCACTCAACAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGGCTACCATTATACTGATGCTTAATAGCTATTCTCTGAGTCTCCCTATTCCTGCAGAACCTGCATTTTATATGAATAGTAGAACTGAAAGCCTTCCCGCGATGCTGTCATGGGAGTACAATTCAAGGGAAACAGGAGGGAGTGAACCGATACTTAAATCAGCTCAAGAATCAGAAAATGAAGTTTCAATTACTGAGCTATACCCTCGCTAG 2055 0.419 MIIRKASVNVVRYSDYGMGAVSCMLLFFLCCLVSQASAQYLFQSCDNNNGNYTANSTYNTNLNTLLSTLSSNTEINYGFYNFSQGQNADRVNAIGLCRGDVEPNECRSCLKDAGGNITQVCPNQKEALIYNDNCILRYSNRSIFGVSEISPVFYMWNANNATEAVEFNEVLQTLMRGLRDRAASGDSRRKYATDNTTTSNFQAIYGLVQCTPDLTQTECNDCLDDAIPQIRTCCNDKRGGRVVLPSCNIRYEDYRFYEQTTIIDPQTPPSTSNTSPEESSNTTVIVIAVIVPTVLLVLLICLFLYLRRRRARKNLAGKSIKKEEQDVDEDEIKIAESLQFDFDTIRVATEDFSHSNKLGQGGFGAVYWGRLSNGQIIAVKRLSRDSGQGDTEFKNEVLLVVKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDPAMKARMDWDKRYRIIRGIARGLLYLHEDSQLRIIHRDLKASNILLDEEMNPKIADFGMARLVLIDQTQANTSRIVGTYGYMAPEYAMRGHFSVKSDVFSFGVLILEIVSGQKNSGINNGENMEDLLSFAWRNWKEGKAINIVDPSLNSNSRNEMLRCIHIGLLCVQENLVDRPTMATIILMLNSYSLSLPIPAEPAFYMNSRTESLPAMLSWEYNSRETGGSEPILKSAQESENEVSITELYPR* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02233 684 MobiDBLite consensus disorder prediction 659 677 - -
Lapu7g02233 684 ProSiteProfiles Protein kinase domain profile. 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02233 684 SMART serkin_6 352 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02233 684 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 38 143 - -
Lapu7g02233 684 MobiDBLite consensus disorder prediction 659 684 - -
Lapu7g02233 684 Gene3D - 37 142 IPR038408 -
Lapu7g02233 684 Gene3D - 149 256 IPR038408 -
Lapu7g02233 684 Pfam Protein tyrosine and serine/threonine kinase 355 619 IPR001245 GO:0004672|GO:0006468
Lapu7g02233 684 Gene3D Phosphorylase Kinase; domain 1 313 427 - -
Lapu7g02233 684 Pfam Salt stress response/antifungal 45 140 IPR002902 -
Lapu7g02233 684 Pfam Salt stress response/antifungal 159 254 IPR002902 -
Lapu7g02233 684 Gene3D Transferase(Phosphotransferase) domain 1 428 629 - -
Lapu7g02233 684 ProSiteProfiles Gnk2-homologous domain profile. 149 256 IPR002902 -
Lapu7g02233 684 ProSiteProfiles Gnk2-homologous domain profile. 40 143 IPR002902 -
Lapu7g02233 684 CDD STKc_IRAK 358 623 - -
Lapu7g02233 684 FunFam cysteine-rich receptor-like protein kinase 10 428 629 - -
Lapu7g02233 684 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Lapu7g02233 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Lapu7g02233 684 FunFam Cysteine-rich receptor-like protein kinase 17 320 427 - -
Lapu7g02233 684 SUPERFAMILY Protein kinase-like (PK-like) 338 653 IPR011009 -
Lapu7g02233 684 FunFam Cysteine-rich receptor-like protein kinase 10 151 256 - -
Lapu7g02233 684 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02233 Lapu-Chr7 38703177 38706479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02233 25 684 Receptor kinase-like Gene Family AT4G21410 49.062 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02233 PK_Tyr_Ser-Thr 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02233 - - vra:106771832 1090.87