Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02231 ATGAAGAGAGGTTCGGTTTATGCAGGAAAAAGCAACAGATCACAACCTGTCAACGCCAAGTACGTTGTGCCAATTCTTGTCTTTATTGGGATGCTGATTTTTATTTGCATCTATTTAAGAGTTATGAAGCCAAGAAAATATTTTGTGGGTGAAGCTAAGGTTGATGATGAAATGATACAATTAGAATCATCACAATTTGACCTTGACACCATCAGACTCGCTACAAACAACTTCTCTGATGCAAACAAGCTTGGACAAGGAGGATTTGGACCTGTTTACAAGGGCACGTTCTTCAATGAACAAGAAGTAGCAGTCAAAAGGTTATGTAGCGACTCTGGCCAAGGAGATACTGAATTCAAGAATGAAGTGCTATTAATGTCAAGGCTTCAGCACCGAAATTTAGTTAGGCTCCTTGGTTTCTGTTTTGAAAGAGAAGAACGACTCCTTGTCTACGAGTTTCTGCCCAATAAAAGTCTTGACAACTTCATATTCGATCATATCGGGCGTGCACATTTGGATTGGAAAAAACGCTACAATATAATTAAAGGCATTGCATATGGTCTTCTTTATCTTCATGAGGATTCTCGGCAGAGGATTATTCACCGAGATCTCAAATTGAGTAATATTCTTTTAGATGATGACATGAATCCTAAGATTTCAGATTTTGGTCTTGCAAGGCTTTTTAATGTGGATCAAACCCAGTTTAATGCAAGTACAATTGCAGGAACCTTTGGATACATGGCACCTGAGTATGCAAGACATGGAAAACTCTCGATGAAGTTAGATGTCTTCAGTTTTGGTGTAATAATGTTAGAGATTATAAGTGGCAAAAAGAATGGAGGATTTCGTAATGGAGAGGATGTGGAGCATCTATCAAGCTTTGCTTGGAAAAACTGGAGGAAAGGGAGAACAGCTGATATTATAGATCCCACCTTAAATAATGCTTTCAAAGATGATATAGTGAGATGCATTCACATTGGACTACTTTGTGTTCAAGAAAAGGCTGCTGATAGACCAACAATGGCATCTGTGGTGCTTATGCTTTACAGCCACTCTTTTTCTCTACCAGTTCCATTGCAACCTGCTTATTTTATGGAAAATAGTTGTTTATCAGTCATCCCGTTTTTCAGGTGTAGTTCCATGGAAACAGGGTCAAATGAACAGAAAAGTTACTGTGCTGATGAATCAGCTAACGAGGCTTCAATTAGTAGTCTATATCCTCGTTAA 1227 0.3847 MKRGSVYAGKSNRSQPVNAKYVVPILVFIGMLIFICIYLRVMKPRKYFVGEAKVDDEMIQLESSQFDLDTIRLATNNFSDANKLGQGGFGPVYKGTFFNEQEVAVKRLCSDSGQGDTEFKNEVLLMSRLQHRNLVRLLGFCFEREERLLVYEFLPNKSLDNFIFDHIGRAHLDWKKRYNIIKGIAYGLLYLHEDSRQRIIHRDLKLSNILLDDDMNPKISDFGLARLFNVDQTQFNASTIAGTFGYMAPEYARHGKLSMKLDVFSFGVIMLEIISGKKNGGFRNGEDVEHLSSFAWKNWRKGRTADIIDPTLNNAFKDDIVRCIHIGLLCVQEKAADRPTMASVVLMLYSHSFSLPVPLQPAYFMENSCLSVIPFFRCSSMETGSNEQKSYCADESANEASISSLYPR* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02231 408 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 405 - -
Lapu7g02231 408 Gene3D Transferase(Phosphotransferase) domain 1 154 354 - -
Lapu7g02231 408 FunFam Cysteine-rich receptor-like protein kinase 28 154 356 - -
Lapu7g02231 408 Pfam Protein tyrosine and serine/threonine kinase 82 346 IPR001245 GO:0004672|GO:0006468
Lapu7g02231 408 CDD STKc_IRAK 84 348 - -
Lapu7g02231 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lapu7g02231 408 ProSiteProfiles Protein kinase domain profile. 78 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02231 408 SUPERFAMILY Protein kinase-like (PK-like) 60 350 IPR011009 -
Lapu7g02231 408 Gene3D Phosphorylase Kinase; domain 1 44 153 - -
Lapu7g02231 408 SMART serkin_6 78 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02231 408 FunFam Cysteine-rich receptor-like protein kinase 10 42 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02231 Lapu-Chr7 38676682 38688540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02231 8 408 Receptor kinase-like Gene Family AT4G21410 52.899 1.68e-141 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02231 PK_Tyr_Ser-Thr 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02231 - - gmx:100790058 661.373