Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02230 ATGGCACCAGAATATGCCTTTGGTGGACAATTCTCAGTAAAATCTGATGTTTATAGTTTTGGCATATTGGTTCTTGAGATTGTAAGCGGCCAGAAAAACAGTTGGACATGTAGAGAGGACAATGAAGGCGATCTTCTAACCTATGAAAAAGTGGCTGATAGACCAACCATGGCCTCTGTTGTACTCATGCTTAGCAGCTTCTCTGTTACGCTTCCATTGCCCTCTCATCCTTCTTTCTCCGTTAGAAGCAGAAATTTATCAGTCATTCAAACAGAAGAGTATGATCCAGCGGCAAGAACATCAACTGAATCAGCTGTTACATCTGCCAAAGCATCAGTGAACGAGACTACCATTAGCGAACCATTTCCTCGCTAG 375 0.4267 MAPEYAFGGQFSVKSDVYSFGILVLEIVSGQKNSWTCREDNEGDLLTYEKVADRPTMASVVLMLSSFSVTLPLPSHPSFSVRSRNLSVIQTEEYDPAARTSTESAVTSAKASVNETTISEPFPR* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02230 124 Pfam Protein tyrosine and serine/threonine kinase 1 47 IPR001245 GO:0004672|GO:0006468
Lapu7g02230 124 Gene3D Transferase(Phosphotransferase) domain 1 1 71 - -
Lapu7g02230 124 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 48 - -
Lapu7g02230 124 SUPERFAMILY Protein kinase-like (PK-like) 1 100 IPR011009 -
Lapu7g02230 124 MobiDBLite consensus disorder prediction 97 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02230 Lapu-Chr7 38673287 38673911 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02230 1 124 Receptor kinase-like Gene Family AT4G23140 35.583 1.41e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02230 PK_Tyr_Ser-Thr 5.5e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02230 - - gmx:113000773 154.066