Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02227 ATGGCAAGAATGATTGCTATAGACCAAGATCGAGGAAATACAAAGAGAGTTGTTGGAACCTTTGGTTACATGGCGCCAGAATACGTAAAACGTGGATATTTTTCAGAGAAATCAGATGTCTTTAGTTTTGGAGTTATAATTTTGGAAGTTATTAGTGCAAAAAGGAATGTTTATCCTATTGTACCATCAAATGATGATGACAATGATAACGAAGAGGATGACGACCTTTTAAGTTACATATGGAGACACTGGAAGAATCAAACACCTCTAAGTATATTAGATGAAGATATCAACGAAATTTTCAATCATGATCAAGTCATTAAATGCATTCAAATTGGTTTATTATGTGTACAAGAGAAACCAGATGATAGACCTACAATGGCACAAGTTGTTTCATATCTTAGTAGTCCTTTAACTGAGTTGCCATTACCGGAAGAACCATCAAATTTTAAGCAAAGTAAAACAATTCAAAAGATGGCCACAAAAGAGTTGATTTCAGGTTCAATATATTCAATTAACCAAATGTCCTTAAGCAAAATAATTCCTCGATAG 552 0.3333 MARMIAIDQDRGNTKRVVGTFGYMAPEYVKRGYFSEKSDVFSFGVIILEVISAKRNVYPIVPSNDDDNDNEEDDDLLSYIWRHWKNQTPLSILDEDINEIFNHDQVIKCIQIGLLCVQEKPDDRPTMAQVVSYLSSPLTELPLPEEPSNFKQSKTIQKMATKELISGSIYSINQMSLSKIIPR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02227 183 SUPERFAMILY Protein kinase-like (PK-like) 7 156 IPR011009 -
Lapu7g02227 183 Gene3D Transferase(Phosphotransferase) domain 1 1 159 - -
Lapu7g02227 183 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 179 - -
Lapu7g02227 183 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02227 183 Pfam Protein tyrosine and serine/threonine kinase 2 134 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02227 Lapu-Chr7 38660471 38661248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02227 1 183 Receptor kinase-like Gene Family AT4G11480 43.979 4.27e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02227 PK_Tyr_Ser-Thr 3.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02227 - - lja:Lj0g3v0067799.1 215.698