Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02224 ATGCTATTTCATGCAACTGCATCACCACCCATTTACAGTGCCCACTACTGCACCAACCTTACCTTTTACCCATCCGACACCACATTTCAATCCAACTTGAATACCCTCCTCTCTTCTCTTGTTTCAAACTCCTCCCTTCCCTCCAACAACGGTTTCCTCCGAACCTCCGTCGCTCAAGGCACCCCCAACGACATCGACGGCCGTTTCCTCTGCCGTGGCGACGTCAACACCACCGTCTGCCACGGTTGCGTCGCAGCAGCAGCAGCGAACATAACGCGCCTCTGTCCCAACTACACCGAATCCTATATCTGGTACGACGTGTGTACGCTAATCTACTCCAACAGTACCTTCGATAATGATAACATAGTTCCCGGGATGCCCATCAACGACGAAGGAAGCACCGTTAACTCAAATCAGAACCAGTTCAACCAATTATTGTCGAGCTTGTTAAACAGTTTGGAGCAAAAAGCTTTGGCGAGTTCCACGGGAGAGAAGAAGTTCGCCGCAGGTGCGGTGAGTGTGACGAGCGCGCAAACGCTGTATGGAATGGCGCAGTGCGAGCCAGACTTATCAAGTGGTGATTGTGCGGCGTGCTTTAGAAGCGCTATTGCAAGTATTCCATCGTGTTGCAACGGAAGTGGCGGAACGAGGGTTTTGCTTCCCATATGTAGCATCAGATACCAACTTTATCCCTTTTTGTACAATTCCACTCCCATGTTGCCGATTCCTTCTTCAGGATGCTGTTGGTGGCGAAGAAGGCAAAGCAAAAGCCGTGGGGATGTCCTGGAATATAATGATAGCAGTCACGACGAAGGAGGACTAGATTGGGCAAGACGTTACAAAATTATTGTTGGCATTGCACGTGGAATTCAATATCTCCATGAAGATTCTCGGCTAAAAGTAATACACCGTGATCTCAAGGCATCTAATATTCTATTAGATGACGATATGAATCCAAAGATTTCCGACTTTGGGATGGCAAAGATTTTTCATGGTGATCAAAGTCAAGAAAATACAAGAACAGGAAGGGTGGTTGGAACTCTGTAA 1047 0.4776 MLFHATASPPIYSAHYCTNLTFYPSDTTFQSNLNTLLSSLVSNSSLPSNNGFLRTSVAQGTPNDIDGRFLCRGDVNTTVCHGCVAAAAANITRLCPNYTESYIWYDVCTLIYSNSTFDNDNIVPGMPINDEGSTVNSNQNQFNQLLSSLLNSLEQKALASSTGEKKFAAGAVSVTSAQTLYGMAQCEPDLSSGDCAACFRSAIASIPSCCNGSGGTRVLLPICSIRYQLYPFLYNSTPMLPIPSSGCCWWRRRQSKSRGDVLEYNDSSHDEGGLDWARRYKIIVGIARGIQYLHEDSRLKVIHRDLKASNILLDDDMNPKISDFGMAKIFHGDQSQENTRTGRVVGTL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02224 348 Pfam Salt stress response/antifungal 136 229 IPR002902 -
Lapu7g02224 348 Pfam Salt stress response/antifungal 17 114 IPR002902 -
Lapu7g02224 348 ProSiteProfiles Protein kinase domain profile. 131 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02224 348 Gene3D - 11 117 IPR038408 -
Lapu7g02224 348 Gene3D - 129 232 IPR038408 -
Lapu7g02224 348 FunFam Os07g0541700 protein 260 347 - -
Lapu7g02224 348 Pfam Protein kinase domain 270 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02224 348 ProSiteProfiles Gnk2-homologous domain profile. 124 232 IPR002902 -
Lapu7g02224 348 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 6 238 - -
Lapu7g02224 348 FunFam Cysteine-rich receptor-like protein kinase 10 127 232 - -
Lapu7g02224 348 SUPERFAMILY Protein kinase-like (PK-like) 260 347 IPR011009 -
Lapu7g02224 348 ProSiteProfiles Gnk2-homologous domain profile. 11 117 IPR002902 -
Lapu7g02224 348 Gene3D Transferase(Phosphotransferase) domain 1 257 348 - -
Lapu7g02224 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02224 Lapu-Chr7 38643718 38647009 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02224 274 347 Receptor kinase-like Gene Family AT4G05200 77.027 1.57e-30 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02224 Stress-antifung 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02224 - - ccaj:109806163 342.043