Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02223 ATGTGCATCTTGAAATCCTCTTCAACCCACTTGCTAATTCTCTCCCTGTTTCTGTTCTTAAACTTTTCAAGTCAGGCTGCACCTACATATAGCTCAAATGCCTGCACAGAGGGATCCTTTTACCGACCCAACACAATCTACCAAACCAACTTGAACCTCCTCCTCTCATCCCTCGTCTCCAACGCCACCCTCCACGACGGTTACTACCTCACCAACATCTCCCTGGGAGCCCCTGGCGAGGTCAAGGGACTCTTCCTCTGCCGTGGTGACGTCACCCCCTCCGTCTGCCATGACTGTGTCGCCGCCGCAGCCGACAACATCACACGCCTCTGCACCAACCAAACAGAGTCCGTAATATGGTACGACGAGTGTATGCTGCGCTATTCCAACCTTTCCTTCCTCAACAACATAGTCCCAAGTATGAGCTACGGTTCCCAACAGAGCGTTCCTGACTCCGATAAAACGAGCTTCATCAATTTTCTTGCATCCGCGTTGAATGGTGTAGCGCAGGATGCCGTGAAGTCTCCTTCGGGTAAAATGTTTGCCACAAAAGAAGCGAATTTCACGAGCTCAATGAGTCTGTACGCCCTGGCACAGTGTAGACCTGATTTATCCGCCTTCGATTGTAACATGTGCTTAACAGGCGCCGTCAGTAGCCTCGGTGAAGGAGAACGAGGTGCACGCAGCCTGCTTCCTAGTTGTAATGTCAGATATGAATTGTACCCTTTTTACAATGTTTCCGCCGTCTCCTCTAAACCAGATTCTCTTCCCCCATCTTCAGGAAAAAGCAGTATCTCTATAATTGTGGCTATTCTTGTCCCAATTGTTGTTGCGGTGGTACTTTTCATTGTTGGCGTCTGCTTCCTGCGCAAGAGAGCAAGCGACAAATACAAAAATTCTTTTGTCCAGGATTCAATTGTGGATGGTCTCACCGATGAGGAGTCCTTGCAATTTGACTTGGCTACGATTGAAACTGCCACGAACAGATTTTCGGATGAGAACAAGATTGGCCAAGGTGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTGACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCAGTAGAGTTCAGGAATGAAGCTGCCCTTGTCGCCAAGCTTCAACATAGAAATTTAGTTAGACTATTGGGATTTTGCTTGGAGGGCCAGGAAAAGATTCTTATCTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTTGATTCTGTGAAGCAAAAAGAGTTAGATTGGTTACAACGCTACAAGATTATAATTGGCATTGCTCGAGGAATTCTTTATTTACATGAGGATTCTCAACTTAGAATTGTACATCGTGATCTTAAAGCTAGTAATGTTTTATTAGATGAAAATATGAATGCAAAGATTTCCGATTTTGGCATGGCAAAGATTTTTCAGGGAGATCAGACTCAAGTAAATACGGGAAGGATAGTTGGGACTTTTGGATACATGTCTCCAGAATATGCAATGCGAGGTCAGTTTTCTATGAAATCAGATGTGTTCAGCTTTGGTGTCTTGGTTCTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTTTATCAATCGAATCATGCTAATGATCTGTTAAGCTTTGCTTGGAAGAAATGGACAGAGCAAACAACTATGGAGTTTCTGGATCCAACTCTGAGAGGTTCTTGTTCGAGAAACGAAGTAAACAGATGCATCCACATTGGTTTATTATGTGTTCAGGAAAATCCATCTGACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGTTATTCAGTTACATTATCAATGCCACGACAACCGGCATCTTTTCTGCGTGGAAGAAGTCCTAACAGGGCAAACCAAGGGCTAGACTCTGATCAGTCTACAACCGATCTTTCTACCTCCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATCACTGAAGTATACCCTCGCTAA 1983 0.4468 MCILKSSSTHLLILSLFLFLNFSSQAAPTYSSNACTEGSFYRPNTIYQTNLNLLLSSLVSNATLHDGYYLTNISLGAPGEVKGLFLCRGDVTPSVCHDCVAAAADNITRLCTNQTESVIWYDECMLRYSNLSFLNNIVPSMSYGSQQSVPDSDKTSFINFLASALNGVAQDAVKSPSGKMFATKEANFTSSMSLYALAQCRPDLSAFDCNMCLTGAVSSLGEGERGARSLLPSCNVRYELYPFYNVSAVSSKPDSLPPSSGKSSISIIVAILVPIVVAVVLFIVGVCFLRKRASDKYKNSFVQDSIVDGLTDEESLQFDLATIETATNRFSDENKIGQGGFGVVYKGVLPDGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDSVKQKELDWLQRYKIIIGIARGILYLHEDSQLRIVHRDLKASNVLLDENMNAKISDFGMAKIFQGDQTQVNTGRIVGTFGYMSPEYAMRGQFSMKSDVFSFGVLVLEIVSGKKNTDFYQSNHANDLLSFAWKKWTEQTTMEFLDPTLRGSCSRNEVNRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTLSMPRQPASFLRGRSPNRANQGLDSDQSTTDLSTSCSIPWSVNEVSITEVYPR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02223 660 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02223 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 290 405 - -
Lapu7g02223 660 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Lapu7g02223 660 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Lapu7g02223 660 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02223 660 Gene3D - 28 133 IPR038408 -
Lapu7g02223 660 Gene3D - 140 243 IPR038408 -
Lapu7g02223 660 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
Lapu7g02223 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Lapu7g02223 660 MobiDBLite consensus disorder prediction 620 642 - -
Lapu7g02223 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Lapu7g02223 660 SUPERFAMILY Protein kinase-like (PK-like) 316 623 IPR011009 -
Lapu7g02223 660 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Lapu7g02223 660 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Lapu7g02223 660 Pfam Salt stress response/antifungal 152 241 IPR002902 -
Lapu7g02223 660 FunFam Cysteine-rich receptor-like protein kinase 10 141 243 - -
Lapu7g02223 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 657 - -
Lapu7g02223 660 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Lapu7g02223 660 MobiDBLite consensus disorder prediction 617 642 - -
Lapu7g02223 660 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Lapu7g02223 660 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Lapu7g02223 660 CDD STKc_IRAK 336 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02223 Lapu-Chr7 38638950 38642436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02223 13 660 Receptor kinase-like Gene Family AT4G05200 48.225 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02223 PK_Tyr_Ser-Thr 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02223 - - var:108324780 1091.64