Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02222 ATGTGCATCTTGAAATCCTCTTCAACCCACTTACTAATTCTCTCCCTGTTTCTGTTCCTAAACTTTTCAAGTCAAGCTGCACCTACATATAGTTATCATGTCTGCACAAATGGATCCTTTTACCGACCCAACACTACATTCCAAACCAACTTGAACCTCCTCCTCTCATCCCTCGTCTCCAACGCCTCCCTCCACGACGGTTTTTACCGCACCAACATCTCCCTCGGAGCCCCCGGAGAGGTCAAGGGACTCTTCCTCTGCCGCGGCGATGTCTCCCCTTCCGTCTGTCAAGACTGCGTCACCGCCGCAACAAAAAACATCACACAGCGCTGTACCAACCACACAGAGTCCATTATCTGGTACGACCAGTGTCTGCTGCGCTACTCCAACAATTCCCGCCTGGACAACATAGTCCCTGGGGTTAACTTGCTCAACGAACAAAACGTCCCTGACACGGACTACTCACAGTTCAACAGTATTCTTGCCTCCACCTTGAGTGATGCCAAACAAAAAGCCCTCAGTTCGGGGAAAAAGTTTGCTACAGAAGAAGCGAATGTCACGAGCTCAATGAAGCTCTACAGCCTGGCGCAGTGCACGCCCGATTTGTCCACTTCTGAATGTGACACGTGCCTCTCAAGCGCCATCAGTTCCTTTCCTAATTGCTGTGACCGCAAACAAGGTGCACGGTCCCTGCTTCCGGGTTGTAATGTCAGATATGAATTGTACCCTTTTTACAATGTTTCCACACAACCAGAGTTTTTCTCTCCGTCTTCAGGAAAACGCAGAATTTCTGTAATTGTGGCGATTGTTGTCCCAATTTTTTTTGCGGTTGTACTTCTCATTGTTGGCGTCTGCTTCGTACGTAAGAGGGCAAGCAATAGATACATTAATTCTTTTGGCCCGGATTCAATTGTGGATGATCTTACTGAGGTGGAGTCCTTGCAATTTGACTTGGCTACAGTTGAAGCTGCCACAAACAGATTCTCGGATGAGAACAAGATTGGCTGTGGCGGATTCGGGGTGGTTTATAAGGGTGTCCTCCCTAACGGACAGGAGATAGCTGTAAAGAGGTTGCAAGTGACCTCCTTGCAGGGTGCAGTAGAGTTCAGGAATGAAGCTTCTCTTGTGGCCAAGCTTCAGCATAGAAATTTAGTGAGACTTTTGGGATTTTGCTTGGAGGGGCAGGAGAAGATCCTTGTCTATGAATACATACCAAACAAAAGCCTTGATCACTTTCTATTTGACCCTCTAAAGCAAAGGGAGTTAGATTGGTCAAGACGCTACAACATTATAGTGGGCATTGCTCGAGGAATGCTTTATTTACATGAAGATTCCCAACTTAGAATTATACATCGTGATCTCAAAGCTAGTAATATTTTATTAGATGAAAATATGAATCCAAAGATTTCAGATTTTGGTATAGCAAAAATTTTCCAAGCAGATCAGACTCAACTAAATACAGGAAGGATCGTTGGGACCTATGGTTACATGTCTCCGGAATATGCAATGCATGGACAATTTTCTGTAAAATCAGATGTGTTCAGCTTCGGTATCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTATATCAATCAAAACACGCGTATGACCTCTTAAGTCTTGCTTGGAAGAATTGGACGGAGCAAACACCTATGGAATTTCTGGATCCAACTTTGAGAGGTTCTTATTCAAGAAATGAAGTAAATAGATGCATCCATATTGGTTTATTATGTGTTCAGGAAAGTCCATCTGACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCAATGCCTCGACAACCAGCATCTTTCCTGCGTGGAAGAAGTCCTAACAGGCTAAACCGTGGACTTGACTCTGATCATTCTACCACCGATCGGTCTACCACCAGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACCGAGTTATACCCTCGCTGA 1977 0.4461 MCILKSSSTHLLILSLFLFLNFSSQAAPTYSYHVCTNGSFYRPNTTFQTNLNLLLSSLVSNASLHDGFYRTNISLGAPGEVKGLFLCRGDVSPSVCQDCVTAATKNITQRCTNHTESIIWYDQCLLRYSNNSRLDNIVPGVNLLNEQNVPDTDYSQFNSILASTLSDAKQKALSSGKKFATEEANVTSSMKLYSLAQCTPDLSTSECDTCLSSAISSFPNCCDRKQGARSLLPGCNVRYELYPFYNVSTQPEFFSPSSGKRRISVIVAIVVPIFFAVVLLIVGVCFVRKRASNRYINSFGPDSIVDDLTEVESLQFDLATVEAATNRFSDENKIGCGGFGVVYKGVLPNGQEIAVKRLQVTSLQGAVEFRNEASLVAKLQHRNLVRLLGFCLEGQEKILVYEYIPNKSLDHFLFDPLKQRELDWSRRYNIIVGIARGMLYLHEDSQLRIIHRDLKASNILLDENMNPKISDFGIAKIFQADQTQLNTGRIVGTYGYMSPEYAMHGQFSVKSDVFSFGILVLEIVSGKKNTDLYQSKHAYDLLSLAWKNWTEQTPMEFLDPTLRGSYSRNEVNRCIHIGLLCVQESPSDRPSMATIALMLNSYSVTMSMPRQPASFLRGRSPNRLNRGLDSDHSTTDRSTTSSIPWSVNEVSITELYPR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02222 658 Gene3D Phosphorylase Kinase; domain 1 299 403 - -
Lapu7g02222 658 Gene3D Transferase(Phosphotransferase) domain 1 404 611 - -
Lapu7g02222 658 MobiDBLite consensus disorder prediction 614 642 - -
Lapu7g02222 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 132 - -
Lapu7g02222 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 449 461 IPR008271 GO:0004672|GO:0006468
Lapu7g02222 658 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Lapu7g02222 658 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Lapu7g02222 658 Pfam Salt stress response/antifungal 152 242 IPR002902 -
Lapu7g02222 658 Pfam Protein tyrosine and serine/threonine kinase 331 596 IPR001245 GO:0004672|GO:0006468
Lapu7g02222 658 CDD STKc_IRAK 334 600 - -
Lapu7g02222 658 ProSiteProfiles Protein kinase domain profile. 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02222 658 FunFam cysteine-rich receptor-like protein kinase 10 404 606 - -
Lapu7g02222 658 SUPERFAMILY Protein kinase-like (PK-like) 314 621 IPR011009 -
Lapu7g02222 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 657 - -
Lapu7g02222 658 ProSiteProfiles Gnk2-homologous domain profile. 137 244 IPR002902 -
Lapu7g02222 658 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 288 403 - -
Lapu7g02222 658 SMART serkin_6 328 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02222 658 FunFam Cysteine-rich receptor-like protein kinase 10 139 244 - -
Lapu7g02222 658 Gene3D - 27 132 IPR038408 -
Lapu7g02222 658 Gene3D - 140 244 IPR038408 -
Lapu7g02222 658 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02222 Lapu-Chr7 38632991 38636810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02222 13 658 Receptor kinase-like Gene Family AT4G05200 50.373 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02222 PK_Tyr_Ser-Thr 3.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02222 - - gmx:547727 996.112