Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02221 ATGGCATCGTATTTCAGCTATGTGATACCCTTTGTCGTTTTTATCTCCCTCTCTTTTACTGCGACTAGAGCTCAGGGACTCTCTTATCAGTACCAAGTTTGCTCACAAAACAAATTCACTCCCAATAGCACCTTCCAGAGCCACCTCACAACCCTATTCTCTTCCTTATCTTCCAAAGCCTCCAACAATGTCCAATTCTTCAACAACACCGTCACCGGGACAAACCCCTCCGACACAGTGTACGGACTATTCATGTGCAGAGGGGACATCCCCTCCGACCTGTGTAATAATTGCGTCGGAAACGCCACACACAGACTATCCACACACGCAGATTGTTCATTGTCCAAAGAAGCAGTGGTGTATTACGACGAGTGCATAGTTCGGTATTCCAACCTCTCTTTCTTCGGCACCGCAGACATGGAAGTGAGCTCAGGCTATGTCCTGGCGAGCCCCATCAACATGACAAACCAAGAAAGCTTCAAGCGTTTGGTGTATGTGAGCTTGAACGAAACTGCGGACGACGCGATGAGTTCAGGTAGTGGCGGTGAGAAGTTCGCGACAAAGGAAACAGACATAGATATATTTCAGAAGCTATATTGTCTCGCACAGTGCACACCAGACCTGTCTCCCCGAGATTGCAGAAGCTGTCTGGGTAGTTTGATAAACTCGGACCTTCCACGGTGCTGTGCAGGGAGGCAGGGAGGAAGAGTTTTATATCCCAACTGCGTCATCAGGTTTGAAATTTACCCTTTTTTTCGATCTCTTGGTTCGGCTCCTACGCCAACACCGCCGCCGAAATTGGGAGAAAGTAGAAGGAGTAGATCAAGAACAATTATCTTAGTTGTTGTACCTATTGTTAGTTTGGCAATTCTCTCTGTTTTCTGCTACTATTTACTAAGGAGAAGAGCAAGAAAGACGACAAAGAACCTTCTTAAAGAAAATTTTGGTGAAGAAAGTTCCATTCTAGAAGGTTTGCAATTTGATTTGGCTACCATTAAAGCAGCAACGGATAATTTTTCAAATGAGAGCAAAATTGGAATAGGTGGATTTGGAGAGGTGTATAAGGGTTTTCTTTCGGATGAACGACATATAGCTGTTAAAAGACTTTCAACAGGTTCTAGACAAGGTTCAGTCGAATTTAAGAACGAGATTTTGTTGATAGCTAAGCTGCAACATAGAAATTTAGTGACATTCATGGGATTTTGCTTAGAAGAGCAAGAGAAGATACTTATTTATGAATATGTGCCGAATCGTAGTCTGGACTATTTTTTATTTGGTACCAAACAAGAGAAGTTAAGTTGGTATGAGCGTTACAAAATTATAGGAGGAACTGCTTTAGGAATTCTTTATTTACATGAATATTCTAGAGTTAAAGTTATACACCGTGATCTTAAACCTAGTAATATCTTATTGGATGAAAATATGAATCCTAAAATATCAGATTTTGGTTTAGCTAGAATTTTTGATATTGATCAAAATCGTGCCGAAACTGACCGAATTGTTGGAACTTACGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCAGAAAAGTCAGACGTTTTTAGTTTTGGAATCATAATTCTTGAGATTATTACTGGTAAAAAAAATGCAAATTCTTATGAATCTCATCATATGGAGGAAGGTCTTATGACTCATGTATGGAGAAATTGGAAGAATGAAACACCAATGGATATATTGGATCCAAATATGAAAGAAAATCATCTTGAAAGTGAAGTTATTCGATGCATTCACATTGGTTTACTGTGTATTCAAGAAAATCCAAATGTTAGACCTAGCATGTCAACAATAGTTTCCTATCTTAATAATCATTCACTTGAATTGCCATTACCTCAAGAACCTGCATTTTTCTTACACGGAATAGATAAAAAAGTTATGCAGCAAGGATCAAGTTCCAGCATATCAGCCAACAGTTCTATGCCATTCTCTGTGAATGAACTCTCTACTAGTAATTTTTATCCACGGTAA 1995 0.3945 MASYFSYVIPFVVFISLSFTATRAQGLSYQYQVCSQNKFTPNSTFQSHLTTLFSSLSSKASNNVQFFNNTVTGTNPSDTVYGLFMCRGDIPSDLCNNCVGNATHRLSTHADCSLSKEAVVYYDECIVRYSNLSFFGTADMEVSSGYVLASPINMTNQESFKRLVYVSLNETADDAMSSGSGGEKFATKETDIDIFQKLYCLAQCTPDLSPRDCRSCLGSLINSDLPRCCAGRQGGRVLYPNCVIRFEIYPFFRSLGSAPTPTPPPKLGESRRSRSRTIILVVVPIVSLAILSVFCYYLLRRRARKTTKNLLKENFGEESSILEGLQFDLATIKAATDNFSNESKIGIGGFGEVYKGFLSDERHIAVKRLSTGSRQGSVEFKNEILLIAKLQHRNLVTFMGFCLEEQEKILIYEYVPNRSLDYFLFGTKQEKLSWYERYKIIGGTALGILYLHEYSRVKVIHRDLKPSNILLDENMNPKISDFGLARIFDIDQNRAETDRIVGTYGYMSPEYAMLGQFSEKSDVFSFGIIILEIITGKKNANSYESHHMEEGLMTHVWRNWKNETPMDILDPNMKENHLESEVIRCIHIGLLCIQENPNVRPSMSTIVSYLNNHSLELPLPQEPAFFLHGIDKKVMQQGSSSSISANSSMPFSVNELSTSNFYPR* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02221 664 Pfam Protein kinase domain 340 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02221 664 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lapu7g02221 664 FunFam Cysteine-rich receptor-like protein kinase 25 144 251 - -
Lapu7g02221 664 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02221 664 ProSiteProfiles Gnk2-homologous domain profile. 142 251 IPR002902 -
Lapu7g02221 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 659 - -
Lapu7g02221 664 ProSiteProfiles Gnk2-homologous domain profile. 27 134 IPR002902 -
Lapu7g02221 664 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Lapu7g02221 664 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 414 - -
Lapu7g02221 664 CDD STKc_IRAK 345 612 - -
Lapu7g02221 664 Gene3D Phosphorylase Kinase; domain 1 300 414 - -
Lapu7g02221 664 FunFam cysteine-rich receptor-like protein kinase 10 415 617 - -
Lapu7g02221 664 SUPERFAMILY Protein kinase-like (PK-like) 323 642 IPR011009 -
Lapu7g02221 664 Gene3D - 145 251 IPR038408 -
Lapu7g02221 664 Gene3D - 27 134 IPR038408 -
Lapu7g02221 664 ProSiteProfiles Protein kinase domain profile. 339 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02221 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Lapu7g02221 664 Pfam Salt stress response/antifungal 34 131 IPR002902 -
Lapu7g02221 664 Pfam Salt stress response/antifungal 154 248 IPR002902 -
Lapu7g02221 664 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 27 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02221 Lapu-Chr7 38602168 38605718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02221 1 664 Receptor kinase-like Gene Family AT4G05200 44.348 0.0 564
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02221 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02221 - - vun:114191422 1009.59