Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02219 ATGGCTTCTTTCAACCTTCTTTACCACTTTATCCTCCTCACCTTCATCAATTTTCCAACCACTAAAGCATACTACGAATATAGTTGTTCAAATTTTCCCAGCAATAGAACTACTCCAAACAGCGCATTCCAATTTAACCTCAGGACCCTTCTATCTTATTTAACCTCCAACGCCACCGCTAACAAGCAATTCTACAACACCACTGTCAGCAGTAGAAACCACTCCGACACTGTCTATGGAATGTTCTTTTGCTGGGGTGACGTCCCCCCTGACCTTTGTACCCAGTGCGTCGCAAACGCAACCACAGCAATATTCCAACCTTCGTCTCCAGGGGATGAGGGCTGTTCCATGTATAAAGAGGTAACCTTTTGGAATGATGATTGCATGATTCGCTTTTCCAACCAATTTTTCTTTTCCATTGCCGACATGAGTCCACATGAAAGCAGCTGCTCGGTCAACAACCACACAATGATGAGTTTGCTTCCCAAAACACTTAACAAAGCGGCAGATGAAGCAGCTAGTTCTCCCATTGGCGCCAAGAAGTATGCCACAAAGGAAGCAAGGGTATCTGGATTTCAGACTCTTTACTGTGAAGCTCAGTGTACACCTGATCTTTCACCCCGAGATTGCAGAAAATGTCTAAATGCTACCATATCTTATGGTTTACAATCTTGCCATGGAAGTCTATCAGGGAGTTCTATAAATCTCAGTTGTAAGATCAAGTACGACACGTACCCGTTCTATCGCCCCAGCATCGCTCCAACACCATCCCAACTTGTTCCTGTAACAATTTCTTCCAACACAGAATCAAAATACTCCCCGGATCCTGCTTATCTTTCCCACAATTGTTCAAGAAACGAAACAACCAACAACGCTTTTTTATCAAATCTCAGAGCGCTTCTCTATTCCTTGTCTTCCAATGCCACCACCAACACCGGCTTCTTCAAGACCACGGTGGACGACGGAAGAAACCCATCCGACACCGTCAGTGGCCTCTTCATGTGCCGCGGGGATCTAAACCCTGCCCTCTGCCAGCTATGCGTCCTAAAAGCAATCCAAAGAATATCTTCAGAGTGCCCCTCTTCCAAAGAGGCTATCGTTTGGTACAATCACTGCATGCTTCGCTATTCCGATGGTCCCTCTCTTTCCACGGAGGACACAAATCCTACCTATCGCCTCTTCAATATCGTCAATACTTCCAATCCCAGCCTGCTGCAACGTTTCTTCACTTGGACTTTGGCCAATACTTTATCTGAACTGAAGGGCCTGACAGATGACAGTACCATTAAGAATTATGGAAAAAAAGCTGTAAAACTGAATGATCACCAAACCCTCTATACTCTTGCTCAATGTACCGCAGATCAATCTAATGGTGATTGCCAAACCTGTTTACGAAACATTTTCAGCACCGAAATTCCATGGTGTTGTTTGGCGAGTCCAGAGGGAGAGGTACTTTATCCAAGCTGTTATATTATGTTTGGCTTGTCCCCATTTCACAGTGAAGCTTCACAAGTTGAGGTGCGCAAGCCAGATACTTCTTCTCCAGCTGCAGTTGGTCATGAAAGCATCACTTTGGAGGGATTGCAATTCGATTTGATTATAATTAAAGCAGCAACAAATAATTTTTCGCCCAAAAACAAAATTGGACAAGGTGGATTTGGAGAAGTTTACAAGGGTATTCTATCTGATGGAAGATATGTAGCTGTTAAGAGGCTTTCAACAAGTTCAAAACAAGGTTCTACTGAGTTTAAGAACGAAGTTTTGTTAATAGCCAAGTTACAACACAAAAATCTTGTGACATTTATTGGATTTTGCTTGGATGACAAGGAGAAAATTCTCATTTATGAATACATGTCAAATGGAAGTCTTGATTATTTTTTATTTGAATATGCAATGATAGGACAATTTTCAGAGAAATCAGATGTTTTCAGTTTTGGTGTCATGGTTCTTGAGATCATTACTGGAAAAAGAAATATAAATGTTTATGAATCACACAATATTGTGGAAGGTCTCTTAGGTCATGTATGGAAACAATGGAAGGATAAAGAACTCTTAAGCATCTTGGACTCAAACTTAAAAGAAGGTTATTCACAAATGGAAGTTCTCACATGTATTCATATTGGTTTGTTATGTGTTCAAGAAAATCCAAATATTAGACCTACTATGGCAATGATTATGTCATTTCTTAATAACCATTCACTTGAATTACCATCTCCACAAGAACCAGCATTTTTCTTACACAAATGTAGAATGGATCAAGAGGTGGGCATACAACAAGAATCAAGTCAGAATGAAGCTGTCAATGGTTCTATATCTATCAATGAGATGTCTATTAGTAATTTTTATCCTAGATAA 2355 0.4068 MASFNLLYHFILLTFINFPTTKAYYEYSCSNFPSNRTTPNSAFQFNLRTLLSYLTSNATANKQFYNTTVSSRNHSDTVYGMFFCWGDVPPDLCTQCVANATTAIFQPSSPGDEGCSMYKEVTFWNDDCMIRFSNQFFFSIADMSPHESSCSVNNHTMMSLLPKTLNKAADEAASSPIGAKKYATKEARVSGFQTLYCEAQCTPDLSPRDCRKCLNATISYGLQSCHGSLSGSSINLSCKIKYDTYPFYRPSIAPTPSQLVPVTISSNTESKYSPDPAYLSHNCSRNETTNNAFLSNLRALLYSLSSNATTNTGFFKTTVDDGRNPSDTVSGLFMCRGDLNPALCQLCVLKAIQRISSECPSSKEAIVWYNHCMLRYSDGPSLSTEDTNPTYRLFNIVNTSNPSLLQRFFTWTLANTLSELKGLTDDSTIKNYGKKAVKLNDHQTLYTLAQCTADQSNGDCQTCLRNIFSTEIPWCCLASPEGEVLYPSCYIMFGLSPFHSEASQVEVRKPDTSSPAAVGHESITLEGLQFDLIIIKAATNNFSPKNKIGQGGFGEVYKGILSDGRYVAVKRLSTSSKQGSTEFKNEVLLIAKLQHKNLVTFIGFCLDDKEKILIYEYMSNGSLDYFLFEYAMIGQFSEKSDVFSFGVMVLEIITGKRNINVYESHNIVEGLLGHVWKQWKDKELLSILDSNLKEGYSQMEVLTCIHIGLLCVQENPNIRPTMAMIMSFLNNHSLELPSPQEPAFFLHKCRMDQEVGIQQESSQNEAVNGSISINEMSISNFYPR* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02219 784 ProSiteProfiles Gnk2-homologous domain profile. 390 498 IPR002902 -
Lapu7g02219 784 Gene3D - 275 380 IPR038408 -
Lapu7g02219 784 Gene3D - 389 498 IPR038408 -
Lapu7g02219 784 Gene3D - 143 247 IPR038408 -
Lapu7g02219 784 Gene3D - 22 137 IPR038408 -
Lapu7g02219 784 ProSiteProfiles Protein kinase domain profile. 542 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02219 784 ProSiteProfiles Gnk2-homologous domain profile. 275 381 IPR002902 -
Lapu7g02219 784 Pfam Salt stress response/antifungal 409 493 IPR002902 -
Lapu7g02219 784 Pfam Salt stress response/antifungal 283 378 IPR002902 -
Lapu7g02219 784 Pfam Salt stress response/antifungal 161 245 IPR002902 -
Lapu7g02219 784 Pfam Salt stress response/antifungal 29 135 IPR002902 -
Lapu7g02219 784 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 276 380 - -
Lapu7g02219 784 ProSiteProfiles Gnk2-homologous domain profile. 138 247 IPR002902 -
Lapu7g02219 784 Pfam Protein tyrosine and serine/threonine kinase 545 627 IPR001245 GO:0004672|GO:0006468
Lapu7g02219 784 Pfam Protein tyrosine and serine/threonine kinase 632 729 IPR001245 GO:0004672|GO:0006468
Lapu7g02219 784 ProSitePatterns Protein kinases ATP-binding region signature. 548 570 IPR017441 GO:0005524
Lapu7g02219 784 FunFam Cysteine-rich receptor-like protein kinase 25 142 247 - -
Lapu7g02219 784 FunFam Cysteine-rich receptor-like protein kinase 25 392 498 - -
Lapu7g02219 784 Gene3D Transferase(Phosphotransferase) domain 1 625 734 - -
Lapu7g02219 784 ProSiteProfiles Gnk2-homologous domain profile. 24 137 IPR002902 -
Lapu7g02219 784 Gene3D Phosphorylase Kinase; domain 1 503 617 - -
Lapu7g02219 784 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 10 257 - -
Lapu7g02219 784 SUPERFAMILY Protein kinase-like (PK-like) 526 753 IPR011009 -
Lapu7g02219 784 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 506 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02219 Lapu-Chr7 38585650 38590992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02219 275 784 Receptor kinase-like Gene Family AT4G23280 32.237 8.45e-72 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02219 Stress-antifung 3.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02219 - - pvu:PHAVU_007G051400g 1030.01