Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02218 ATGATAGGCAAAGGCGGATTTGGAGAGGTCTATAGGGGTATTCTTTCAGATGGACAAGAAATAGCTGTGAAGAGGCTTACTGGAAGCTCTCGGCAAGGTGCAGTAGAGTTTAAAAATGAGGTTCAAGTTATAGCCAAACTTCAACATAGAAATTTAGTGAGATTACTAGGATTTTGCTTAGAAGAAGATGAAAAAATACTCATTTATGAGTACGTGCCAAACAAGAGCCTTGATAATTTTTTACATGATATCAAGAAACGAAGACTATTATCTTGGTTAGAGCGACAGAAGATTATAAAAGGAATTGCACGAGGAATCTTATATCTACATGAAGATTCTTGTTTAAAAATAATACACCGTGATCTCAAACCTAGTAATGTTTTATTAGATAGTAATATGAATCCAAAAATTTCAGATTTTGGTATGGCTAGAATTGTTGCTGGAGATGGACTTGAAGAAAGTACCGGCAGAATTGTAGGGACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCGGTGAAATCTGATGTATTTAGTTTTGGAGTTATGGTTCTAGAAATTATCAATGGAAAAAGAAAATGTTATTCATCTGAACCAGAAGTTATTGATGACATCCGGAGACATGCTTGGACAAAATGGACAAAGGAAACACCACTAGAACTATTAGATCCGGACATAGGAGAACCTTATTCTCGTGAAGAAGTCATCAAATGTATCCACATTGGGTTGTTGTGTGTTCAGGAAGATCCAAACGATAGACCTACAATGGCAACAGTTGCGTTTTACCTCAACAATCCTTCAATCAGCTTGCCTCCTCCTCATGAACCTGGATATTTTAAGCATAACAGAAAAGAAGACAACACGACTTCCAATAAAGAATTGGATAATATCAATGATTCCATCAATGAAATTTCTCTAACTAAATTCTTTCCACGGTAA 951 0.3575 MIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEEDEKILIYEYVPNKSLDNFLHDIKKRRLLSWLERQKIIKGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAGDGLEESTGRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIINGKRKCYSSEPEVIDDIRRHAWTKWTKETPLELLDPDIGEPYSREEVIKCIHIGLLCVQEDPNDRPTMATVAFYLNNPSISLPPPHEPGYFKHNRKEDNTTSNKELDNINDSINEISLTKFFPR* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02218 316 ProSiteProfiles Protein kinase domain profile. 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02218 316 SMART serkin_6 1 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02218 316 Gene3D Phosphorylase Kinase; domain 1 2 72 - -
Lapu7g02218 316 Gene3D Transferase(Phosphotransferase) domain 1 73 273 - -
Lapu7g02218 316 ProSitePatterns Protein kinases ATP-binding region signature. 2 24 IPR017441 GO:0005524
Lapu7g02218 316 Pfam Protein kinase domain 2 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02218 316 FunFam cysteine-rich receptor-like protein kinase 10 72 274 - -
Lapu7g02218 316 MobiDBLite consensus disorder prediction 277 299 - -
Lapu7g02218 316 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 308 - -
Lapu7g02218 316 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Lapu7g02218 316 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 1 71 - -
Lapu7g02218 316 SUPERFAMILY Protein kinase-like (PK-like) 1 288 IPR011009 -
Lapu7g02218 316 MobiDBLite consensus disorder prediction 281 296 - -
Lapu7g02218 316 CDD STKc_IRAK 2 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02218 Lapu-Chr7 38579441 38582612 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02218 2 316 Receptor kinase-like Gene Family AT4G23140 55.963 2.70e-127 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu7g02218 Pkinase 2.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02218 - - gmx:100793219 563.148