Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02196 ATGCAAGACTTTTTGGGCTCTCTTCGCCGCTCCCTGGTTTTCCGAGCAGGGGGCGACGATGCTCCTTTTGCCGGAATCGCCGACAAGCTTGGCTCCGCCATTCGCAAATCGCGAATCGCATTCAAACCTCCTCCTCCTCCCATCTGGTGGCGCAAGGGCGAGTTGATTGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATCGCGCCTGGTAGCGCTTACAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCGAGAGAGGATAATTCCTTAAATATTCTGCTGGAGTTCGTACCCGGTGGTTCTATCTCATCACTTTTGGGGAAATTTGGATCCTTCCCTGAATCCGTAATAAGGATGTATACGAAACAGCTTTTACTGGGCCTTGAATACCTTCACAATAATGGCATTATTCACAGAGATATTAAGGGAGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACCATCAATGGTGCAAAATCAATGAAGGGCACACCACATTGGATGTCCCCTGAAGTTATTCTACAAACAGGACATACAATCTCCACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGGAAGCCTCCATGGAGTCAAGAGTATCCCCAGGAGGTTTCAGCTCTATTCTATATTGGGACAACTAAATCTCATCCACCCATACCTGAACATCTGTCTGCTGAGGCAAAGGACTTTTTGCTAAAATGCTTCCACAAGGAGCCAGATTTAAGGCCTTCTGCATCTGAGTTGTTACAGCATCCGTTCATCACCTGTGACTATCATGGATCTCATTCAATCTTACAGAATTCAATCAGGGACTCTTGCAATAAGATGGCAACATATGGGATGAACTCTAGAACCTTCTTGGATTCTGTCCAGGGATCAACTTGCACAGGCTTGAAGGATGTTTGTCAGATAGATAGCATGAGGTTCTCAACTGCATATCATAAAGCAGATTCCTACCAGAGAGCAGACAACAATGATGATGACATGTGTCTGATGGATGAAGATGATTTTTTGATTGATTCATCAGCAAAATCTGAATCTCTCTTAGCTTCTGATGATACGAAGAGTTGCAATCCTTTGTGCAAACCTGCGGATGACCAGCCTTGCAATTTTAATGAAACCCAATATCTAGAGAAAAGCGGACCGAACTTGTCATTTTCAAGTGAGCCTCTAGGAACTGAAGATGATGAAGAAGTTACTGAATGTAAAATTAGAGACTTCCTTGATGCTAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAGGAATTCTTTAGCATATCAAATGCAGCCATTACTCCTACTCCCATTGCAGTTGCAAAGAGTAAAGTTATTTCGGGTGTTCCAAATGTAACATCAAAAGTCAGATCTCCTAGTCAGGCTTGGAGACGGTTCTCAATGGTTGGCAGTGCTACTGTAGCAAGCCCTGGGAGTCATACCAAATACCGATCGAAGCTTAGTGGTGTTCACTGTCAACCTTTGCAGGAAATTCAGCCACCTGAGCTTAATGAATCAAAGGAGACTCTTCATGATGCTGAACTGGAATCATCTAGTGTAAGCTCAAACTTCTCTGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTTGAGTGGAAGCGAGAGATGATGCGTCGGGCCGGAACTGGAGGAAAGATAACATCTCCAAAGGATCGCTAA 1866 0.4427 MQDFLGSLRRSLVFRAGGDDAPFAGIADKLGSAIRKSRIAFKPPPPPIWWRKGELIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAYKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREDNSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQEYPQEVSALFYIGTTKSHPPIPEHLSAEAKDFLLKCFHKEPDLRPSASELLQHPFITCDYHGSHSILQNSIRDSCNKMATYGMNSRTFLDSVQGSTCTGLKDVCQIDSMRFSTAYHKADSYQRADNNDDDMCLMDEDDFLIDSSAKSESLLASDDTKSCNPLCKPADDQPCNFNETQYLEKSGPNLSFSSEPLGTEDDEEVTECKIRDFLDAKALELKKLQTPLYEEFFSISNAAITPTPIAVAKSKVISGVPNVTSKVRSPSQAWRRFSMVGSATVASPGSHTKYRSKLSGVHCQPLQEIQPPELNESKETLHDAELESSSVSSNFSERQRKWKEELVEELEWKREMMRRAGTGGKITSPKDR* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02196 621 FunFam Mitogen-activated protein kinase kinase kinase 2 49 341 - -
Lapu7g02196 621 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 326 - -
Lapu7g02196 621 SUPERFAMILY Protein kinase-like (PK-like) 50 314 IPR011009 -
Lapu7g02196 621 FunFam Serine/threonine-protein kinase STE11 47 140 - -
Lapu7g02196 621 Coils Coil 90 110 - -
Lapu7g02196 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Lapu7g02196 621 ProSiteProfiles Protein kinase domain profile. 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02196 621 SMART serkin_6 50 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02196 621 Gene3D Transferase(Phosphotransferase) domain 1 50 344 - -
Lapu7g02196 621 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Lapu7g02196 621 CDD STKc_MAPKKK 50 313 - -
Lapu7g02196 621 Pfam Protein kinase domain 51 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02196 Lapu-Chr7 38393300 38405949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02196 1 614 MAP Kinase Kinase Kinase AT3G06030 55.387 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu7g02196 Pkinase 2.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02196 - K20606 gmx:100795863 1077.77