Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02168 ATGAATGGTGCTGCATATGTTGAGGCAGAGTGCTGTGAGTTTGTGGAAGCTGATCCTACAGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTCTACAGAGCATTTGATGAGTACCAAGGGATAGAAGTGGCATGGAATCAAGTAAAGCTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGTTGTACAGTGAAATCCATCTTCTCAAGACATTGAAGCACAAGAACATCATGAAGTTCTATACTTCCTGGGTTGATACTACCAGCAGACACATTAATTTTGTCACTGAGATGTTTACATCTGGGACTCTAAGACAGTACAGACTTAAGCACAAACGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGACAGATTTTGGAAGGGCTTCTGTATCTGCACAGCCACGATCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATCGGTGATCTTGGCCTTGCTGCGATTCTCCGAAAATCTAGTGCTGCTCGTTGTGTTGGCACACCTGAGTTTATGGCTCCGGAGGTGTATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCGTCTTAGAGATGGTCACTTTTGAATATCCTTATAGCGAATGCAACCATCCCGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAACCAGAAGCTCTTTACAAAGTAGTCAACCCCGAGGTAAGGCAGTTTGTAGAGAAATGCTTAGCAACTGCGTCCCTCAGACTTTCAGCTAAGGAACTCTTGGAGGATCCTTTTCTACAAATTGATGATTATGGATTTGACTCGAAAGTAGTGCAGTATCAAAGAGACTGCTATGAAGTAACCCCATTAATCAGACAGCCTTTGAATGGAATTTATAGCATTAACAACACCTCAATGAGTGGGTACACTGATAATCTTGGTGGTAATGGACCGGTATCCGAATTGGATTATCATCAAGACGATTTTGAAACGAGTGAAATCGGTCTCTTTGATTTTGAAGAGGATGACAATTTGGCTGAAGTTGACACCACAATCAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTTTGAGACTCAGAATAGCAGATAAGGAAGGTCGAATTCGAAACATCTACTTCCCATTTGACATTGAGACTGATACTGCATTGAGCGTTGCAAATGAAATGGTGGCTGAGCTTGACATAACTGATCAAGATGTAGCAGATTTAGCAATTATGATAGACAATGAAATTGCAACATTGGTTCCGGAGTGGAGAACAGGAGCCAGAATAGAGGAAAATTCAGAATGTTCAAGTGCAGGTGTCTGCCTCAATTGTGCTGCAAACGGTCACTTGTTTGATTATGTATCATCAAATAATCCATGTGGCAAGAACCTTCAATTTCTTCATTGTTCTAAAAATGGATGTGCTGCAATTCATGGCCGATTTGAAGAGATAACATACCAAGTTGAAGGGTCTGCAAGTAGTGCTACCGACGGTGCACCGGATGCATCTAGCCATTCCGATGGCATTCATTATACAGATATTTGGGCTCAGAGAGATGAGCCAGAGTTATGCCATGAAGAGCTAAAAGACATACACTGTGACCAAACTCATGAGGTATCAAACCCGTTGAACATCAAGGAGGAAGGAAAGACTGTTCATGTGGATGAAGAAAGTGGCCTCAATACCAGAAAGCCTCATTCAAACCCTGCATCAAATTGTGTTTTGTTGGATTATGAAAATGAAATTAGGCAAGAATTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAACAACTGGGGGTTAAGCCAAAATTCATTTCATCTCCTGACACCGAAAAATTAAAGTGTGGGAAAGATGGAAATCTGAGGTTATCAGCTCCATCCAAATTGAAGCTACCAAAAAATAAACCACAATTGACATCTATAGTTTCTGGGAAGCATTTTCCTGTCGAAGACGAGAAATGCAACAGTTTTGCTGATCAAATGGTAGAAAATGTTGATGAGATTAGTCAGTCTAACAGTCCTGAGCGAATGCTCACAGCCAAGGATTTCTTTACTGGAGCTTTGTTTCCACACTCGCTTCAGAGGGCAACCTCCCTTCCTGTTGATGCAATAGGTTTCTAG 2193 0.4127 MNGAAYVEAECCEFVEADPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTTSRHINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSSAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCVLEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVVNPEVRQFVEKCLATASLRLSAKELLEDPFLQIDDYGFDSKVVQYQRDCYEVTPLIRQPLNGIYSINNTSMSGYTDNLGGNGPVSELDYHQDDFETSEIGLFDFEEDDNLAEVDTTIKGRRREDDGIFLRLRIADKEGRIRNIYFPFDIETDTALSVANEMVAELDITDQDVADLAIMIDNEIATLVPEWRTGARIEENSECSSAGVCLNCAANGHLFDYVSSNNPCGKNLQFLHCSKNGCAAIHGRFEEITYQVEGSASSATDGAPDASSHSDGIHYTDIWAQRDEPELCHEELKDIHCDQTHEVSNPLNIKEEGKTVHVDEESGLNTRKPHSNPASNCVLLDYENEIRQELRWLKAKYQMQLRELRDQQLGVKPKFISSPDTEKLKCGKDGNLRLSAPSKLKLPKNKPQLTSIVSGKHFPVEDEKCNSFADQMVENVDEISQSNSPERMLTAKDFFTGALFPHSLQRATSLPVDAIGF* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02168 730 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 663 - -
Lapu7g02168 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Lapu7g02168 730 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Lapu7g02168 730 Coils Coil 600 620 - -
Lapu7g02168 730 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Lapu7g02168 730 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02168 730 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Lapu7g02168 730 CDD STKc_WNK 22 281 - -
Lapu7g02168 730 FunFam Probable serine/threonine-protein kinase WNK1 8 105 - -
Lapu7g02168 730 FunFam probable serine/threonine-protein kinase WNK9 375 459 - -
Lapu7g02168 730 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Lapu7g02168 730 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02168 730 Gene3D - 376 460 - -
Lapu7g02168 730 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02168 730 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02168 Lapu-Chr7 38076610 38081015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02168 1 501 MAP Kinase Kinase Kinase AT3G22420 58.627 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lapu7g02168 Pkinase 4.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02168 K08867 - gmx:100804179 1292.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02168 7 38076610 38081015 Lapu7g02168 7 38076610 38081015 ECH