Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02142 ATGTTCTCTTCCACATATGACTCCAACCTTTTTCCAAACTTCCCTTCCTCTTCTTACCCTATCCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCAACACCTTTTTTGATGACCCTCTTCTTGTTCCCTTCACACCCATCACACATGGTCCTCCATTCCCTGAAGAAACTGTTGCCAATTTTGCAGTTACTGACTGCACTGCCATTCTTGAACAGGATGCAAACACTAACTATGGTTCCCACTATGGTAGCATGTCCAATTTTCTGACCCAGAAACCAGCCATAGCCAAGAAAGACAGGCACAGTAAGATTCACACATCTCAGGGTTTGAGGGACCGTAGGGTGAGATTATCAAGCGAAATAGCTCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTTTTCACAAAGTCCGAGAATGCGATCAAAGAACTAGCCCAAAGTAAGCATAGCGGCAGTATTAGTGGGGGTGACAAGTGTTCCCGCGACGCTTCTGTGGATTCAAATAACAACAAATCATTGGCGGGTTGTGGGGGTGACGGTTCTAAAGGGAGGAAGTCAAAATGGGCACAGAAGGATGATGCTTGTGTTCAGACCAAGAAGGAGTCAAGGGAGAGGGCAAGAGCAAGAGCAAGAGAAAGGACTTGTTACAAAATGTGTAGCAATAGAAGGGTGCAGCAAGACTTTGATGAAAGGTGCCCTGCAACTGCAAACACTCAAACGCTGCACCAATTGAGGTCATCCATTCAGCCTGAACCTGAAGCTTGCGCGAGATGGGTTCAGCCTTATAATTATAACCCTTTTCTCATTCATAGTGAAGCACCAAGAGATGGATTTGACGTCATTGAAGAATCTATTATGATAAAAAGGAACATGAAGCCGTCATCTATGATGGCTTCTCATCACCAAAACCAAAGCCAAAACCTTGTGATCCCTAGGGATACAAGTTTCGACAACAATATGTGCCCCTTGTTACCCTATTCCGCTCCAGACTGGGACACTAATGGGGCCGCTAGTGGACGCTCCAACTTCTGTGGAATAGGCACCGTGAACCTATCTACATGTTTCTTGAACCCGTGA 1116 0.4507 MFSSTYDSNLFPNFPSSSYPILPFLIDPENDFASNTFFDDPLLVPFTPITHGPPFPEETVANFAVTDCTAILEQDANTNYGSHYGSMSNFLTQKPAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAQSKHSGSISGGDKCSRDASVDSNNNKSLAGCGGDGSKGRKSKWAQKDDACVQTKKESRERARARARERTCYKMCSNRRVQQDFDERCPATANTQTLHQLRSSIQPEPEACARWVQPYNYNPFLIHSEAPRDGFDVIEESIMIKRNMKPSSMMASHHQNQSQNLVIPRDTSFDNNMCPLLPYSAPDWDTNGAASGRSNFCGIGTVNLSTCFLNP* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02142 371 MobiDBLite consensus disorder prediction 174 188 - -
Lapu7g02142 371 Pfam TCP family transcription factor 98 233 IPR017887 -
Lapu7g02142 371 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Lapu7g02142 371 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 308 IPR005333 GO:0003700
Lapu7g02142 371 MobiDBLite consensus disorder prediction 197 217 - -
Lapu7g02142 371 ProSiteProfiles R domain profile. 213 230 IPR017888 -
Lapu7g02142 371 MobiDBLite consensus disorder prediction 159 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02142 Lapu-Chr7 37791506 37792768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02142 97 338 TCP Transcription Factor Family AT1G67260 35.361 2.60e-28 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu7g02142 TCP 2.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02142 - - aprc:113871835 577.785