Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02137 ATGGACACCCCAGATAGGAGCAAGATCAACACTCCTCTTTCTCAATTTGAGGATTCACCTGTATTTAACTATATCAGTAATCTATCTCCTATAGAGCCTGTGAAGTCTGTTCACATTACTCAGACTTTCAATTCACTTACCTTTTCATCTCCTCCATCTGTTTTCACATCACCCCATGTCAACTGTCACAGGGAATCCAGATTCCTCAGGAGGCATAACCTTTTGGATGCATCCAAACCCAAGGGTTCATCAGAAGATATAAATAATGTTTATTCATGTGAAAAGGCTCCTGCAGATTCAACTCAACCATGTCATGAATCAAGTGAGCCACAGGAAAATACCAATCCAAATATTTCTGTAAGAGATGCTTCAATCGAGCCATGTAATGAAAACCCAAATATCTCAATTGAGCTTCATCAAGGCTTGAAATATAATTTGGCTAGCCCAGGATATGATCCTGTACTCTGTGCTGAGGAGACTGACTCTCTTTTGGAACTGCCGGGCAAGCCAGGATCAGATGTTGCCTATGTTCCAGATGACTCTGAGAAGGATTCAATTGAGGGTAAAATGCATCTTCCAGGTTTGTGTCAAAATGAGGAAAAAATTCAAAGCCCAGATTGTGGTGTGGATGATTTAATTACTGAAGCCTCTGATCTGTTAATGTTTAGCCCCCCAAATATGACAGAAGCTTTTAAGGATATAAATAAACAATTAAATCCTTCACCTAAGCTTACCAATTTTAGGACTTTGTTACCACAATCTGCCACCAATGATGGTCAACGAACGCAGATTGTTAATTCAGTTGCTTCTGGTTCTGAACATGAAATCGAAAATCATCCTTGTGAATCAGCAGCAGCCACAGACACAGTTCAGAGACAAGATAATCATACCAATGTTGCCGTGGTGGCTAGCAATCCAACTGAGAAAATGAATGATAAGCTTGTTTATGTGACACATCGTGGTATACGGAGACGCTGTTTAGATTTTGAGATGGCCAGTGTCCAAAGGAAGAACTTAGATGGTAAATTAAGCACCAATTCCAGTACAGAAAAATCTGATGAGATGGATGTTAGTAAAGGAAAGCAACTGCTCCCCATAAAACATAGTGGGGATTCACGGAAGTGTGTTTTGCCAGGAATTGGTTTGCACTTGAATGCACTTGCAACCTTAAATGATTGCAAAAACATAAAAATTGAGAAGTTGCTATCTGGAAGGCAACCTAACATGCCCAGCTCCTCTTCATCCTTGCAACTTTCTGCAAGCCAAGAACATCAACTATCATTGATACCTGCATCAATGGAAAAAGAGTTGGAGCCATCAGAGAATGAAGTTCAGCCTGGTGAAGATTGTACCCAGCCTTTGGTTCAAATAGCTGGTGAAGATTTCCTGCAGAATAGTCCAAAAAAGAAAAGGCGCAAGTTGGAACCAGACGGGGAAGGGGAGTCTTGTAAGCGCTGTAATTGTAAGAAATCAAAGTGTTTGAAACTTTATTGTGAGTGCTTTGCTGCTGGAGTCTACTGCATAGAGCCTTGTTCATGTCGTGATTGCTTCAACAAGCCTATTCATGTTGATACCGTTCTTCAAACTCGCCAGCAGATTGAGTCTCGAAATCCACTTGCTTTTGCTCCTAAAGTCATACGGAGTTCTGATTCTGTACCTGAAATTGGGGATGACCCTAACAAAACTCCAGCTTCAGCACGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCCTAAAGAAATACTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATAAGCTGCAGATGCGAAGGATGCAAGAACACATACGGTAGAAAGGATGGTTCTGTTTCTTCTGGAATAGAAGCCAAGCCCGAAGAAGAAACAGAAGCATGTGAAAAGAGTGTGATGGAAAATGCTTCACATAAAACTGAAACACAGAATACTGAAGACCATCCAGACCATGCTCTTCCTACAACACCATTGCGTCTTTCCAGATCAATGCTCCCATTACCCTTTTCATCAAAGGGTAAGCCACCAAGATCTTTTGTTACTACCATCTCCAGTTCTGGATTGTTTGTCAGCCATAAGCTCGGGAAATCAAGTGCTCCGCGGTCTCAACCTAAATTTGAAAAGCCTTCGCAAACTGTTCCGGATGATGACTCTCCTGTCACCTGCATCAAAACTTCTTCTCCAAATGGCAAGAGGATCTCCTCTCCTAATTGTGACGTGGGATCATCTCCTACTCGCAGGGGTGGGAGGAAGTTGATTTTACAATCAATCCCTTCATTTCCTTCTCTCACCCCTCACAATCTTCGGAGTGACTGA 2316 0.4188 MDTPDRSKINTPLSQFEDSPVFNYISNLSPIEPVKSVHITQTFNSLTFSSPPSVFTSPHVNCHRESRFLRRHNLLDASKPKGSSEDINNVYSCEKAPADSTQPCHESSEPQENTNPNISVRDASIEPCNENPNISIELHQGLKYNLASPGYDPVLCAEETDSLLELPGKPGSDVAYVPDDSEKDSIEGKMHLPGLCQNEEKIQSPDCGVDDLITEASDLLMFSPPNMTEAFKDINKQLNPSPKLTNFRTLLPQSATNDGQRTQIVNSVASGSEHEIENHPCESAAATDTVQRQDNHTNVAVVASNPTEKMNDKLVYVTHRGIRRRCLDFEMASVQRKNLDGKLSTNSSTEKSDEMDVSKGKQLLPIKHSGDSRKCVLPGIGLHLNALATLNDCKNIKIEKLLSGRQPNMPSSSSSLQLSASQEHQLSLIPASMEKELEPSENEVQPGEDCTQPLVQIAGEDFLQNSPKKKRRKLEPDGEGESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCRDCFNKPIHVDTVLQTRQQIESRNPLAFAPKVIRSSDSVPEIGDDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNTYGRKDGSVSSGIEAKPEEETEACEKSVMENASHKTETQNTEDHPDHALPTTPLRLSRSMLPLPFSSKGKPPRSFVTTISSSGLFVSHKLGKSSAPRSQPKFEKPSQTVPDDDSPVTCIKTSSPNGKRISSPNCDVGSSPTRRGGRKLILQSIPSFPSLTPHNLRSD* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02137 771 MobiDBLite consensus disorder prediction 347 361 - -
Lapu7g02137 771 SMART CXC_2 567 608 IPR033467 -
Lapu7g02137 771 SMART CXC_2 481 522 IPR033467 -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 757 771 - -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 615 648 - -
Lapu7g02137 771 ProSiteProfiles CRC domain profile. 482 607 IPR005172 -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 96 126 - -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 694 742 - -
Lapu7g02137 771 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 570 605 IPR005172 -
Lapu7g02137 771 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 484 519 IPR005172 -
Lapu7g02137 771 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 766 IPR044522 GO:0003700
Lapu7g02137 771 MobiDBLite consensus disorder prediction 340 361 - -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 610 656 - -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 694 771 - -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 461 484 - -
Lapu7g02137 771 MobiDBLite consensus disorder prediction 464 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02137 Lapu-Chr7 37707784 37713878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02137 11 766 CPP Transcription Factor Family AT3G22780 42.452 3.60e-154 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lapu7g02137 TCR 2.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02137 - - var:108326442 1395.95