Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02124 ATGAATCCTCAAGGTCTAGTGAAGGAAGAGTTTCTTGGAGAAAGTTCTTCCTTTTGTGGTGGCTACGCTCCGCAGCCAGTAATGATTGTTCCTCAACCAATTGAGGGGCTTCATGAAACTGGTCCTCCACCATTCCTCACAAAAACATACGACATTGTTGATGACCCTTCCACTAACCATATAATTTCCTGGAGCACGGGGAACAACAGTTTCATTGTGTGGGATCCACAGGCCTTTTCCATAACCCTTCTTCCCAGATTCTTCAAGCACAACAATTTCTCCAGTTTTGTCAGGCAACTCAACACCTATGGGTTTAAGAAGGTTGATCCAGATAAGTGGGAGTTTGCTAATGAGATGTTTCTTAGAGGGCAAAGGATTCTTTTGAAGAACATTAGAAGGAGGAAAACAAATCATCAATCTCATGCGATGCAGCAAGGTGTGGATCCTTGTGTTGAGGTGGGGCAGTTTGGATTAGATGGAGAAGTTGATAGGTTGAAGCGTGACAGGCAAGTTCTTATGGTGGAGTTGGTGAAACTCAGACAACAGCAACAGGATACTAGAGTTCACATTCAAGCAATGGAAGGAAGGATTAAAAGGACTGAACAGAAACAGCAACAAATGATGAATTTCTTGGCCAGGGCAATGCAGAACCCCAACTTCGTGCAACAATTGGTTCAGCAAAAGGAGCGGAGAAAGGAGCTCGAGGAAGCTTTTTCCAATAAGAGGAGTCCTCTTGATCAAGGGCCTAGTAATGTTGTTGATGTAGGAGAGTTAGATTGCTGCGGACAGTACTCAAGTTTTGTTAAACTCGAACCACAATACACTGACAAGGTATTAGAGTTTGAGGTACCTGATCTAGACCTTGGTTTGAATCTGGAGGAGCAAAGTGGAAGCCAAAAGAGAATGGAGGGAGATTATATTGAACTTGAAAGTATAGATAACATTGATGAAGTGTTTTGGCAAGATTTGCTGAATGAGGGTATTGAAGATCAAGGTGTACTAGGTGTAGATGTATTGGCTCAGCAACTTGGTTATTTGGCATCTACTCCTAAATAG 1056 0.4261 MNPQGLVKEEFLGESSSFCGGYAPQPVMIVPQPIEGLHETGPPPFLTKTYDIVDDPSTNHIISWSTGNNSFIVWDPQAFSITLLPRFFKHNNFSSFVRQLNTYGFKKVDPDKWEFANEMFLRGQRILLKNIRRRKTNHQSHAMQQGVDPCVEVGQFGLDGEVDRLKRDRQVLMVELVKLRQQQQDTRVHIQAMEGRIKRTEQKQQQMMNFLARAMQNPNFVQQLVQQKERRKELEEAFSNKRSPLDQGPSNVVDVGELDCCGQYSSFVKLEPQYTDKVLEFEVPDLDLGLNLEEQSGSQKRMEGDYIELESIDNIDEVFWQDLLNEGIEDQGVLGVDVLAQQLGYLASTPK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02124 351 Pfam HSF-type DNA-binding 45 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02124 351 Coils Coil 162 182 - -
Lapu7g02124 351 Gene3D - 37 136 IPR036388 -
Lapu7g02124 351 PRINTS Heat shock factor (HSF) domain signature 45 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02124 351 PRINTS Heat shock factor (HSF) domain signature 83 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02124 351 PRINTS Heat shock factor (HSF) domain signature 96 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02124 351 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 263 IPR027725 -
Lapu7g02124 351 SMART hsfneu3 41 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02124 351 FunFam Heat shock transcription factor 1 38 135 - -
Lapu7g02124 351 SUPERFAMILY "Winged helix" DNA-binding domain 41 134 IPR036390 -
Lapu7g02124 351 ProSitePatterns HSF-type DNA-binding domain signature. 84 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02124 Lapu-Chr7 37562595 37564341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02124 27 349 HSF AT3G22830 55.647 1.23e-128 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lapu7g02124 HSF_DNA-bind 2.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02124 K09419 - gmx:100809515 570.852