Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02115 ATGCCAGTGAGGCAGATGAAAGAAAGCTCGGAGCAACACCTTGTGATCAAACCCCATTTGCAGAATCATATGAATCCAGCCAAGAAGACAACCAAAGCTGCCCAAAATGGCAAAGGTCCACCGCCACTAGAAAACGATGGCCAAGCTTTGCCTCACTCAAAGAACAAGGGAAGAAGAAGGGGGAGAGGTGGCAGAAAACCCGATCAAGGAGATGTTATGATGAGGCCTAGATGCAGACCATGCACTGCAACACTTACAAGTAGTGCAAATGGGAATGTCGAAAATGGTTTCATCTCTGATATAGGTTTTCCCACTTCAAGCAAGTCTTTGAGCTTTGCTCGTAGGCCTGGATATGGACAAGTTGGGACAAAATGCATTGTGAAGGCTAACCACTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAATATGATCATGCATTTAAGTTCATCCTGTCTATCATAGCAGAACTAGTGAGGCTCTATAAAGAGTCTGACTTGGGGATGAGACTTCCAGCATATGATGGCAGAAAAAGTCTGTACACGGCAGGGCAGCTTCCCTTTGCTTGGAGAGAGTTTAAGATTAAGCTTGTAGATGAAGAGGAAGGAGTTAATGGCCCCAAGAGGGAAAGAGAGTACAGGGTGGTGATCAAATTTGTTGCTCGGGCAAACTTGCATCATTTGGGCCAGTTTCTGGCTGGTAAGCGTGCTGATGCACCCCAAGAGGCACTTCAAATCCTGGACATTGTACTAAGAGAGCTGGCAACTAAGAGGTATTGCCCAATTGGAAGGTCCTTCTTTTCACCTGATATTAGAACACCGCAACGGCTTGGAGAGGGATTAGAGTCATGGTGTGGATTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCATCTGCTGCATTTATTGAGCCCCTTCCAGTAGTGGAATTTGTTGGGCAGCTACTAGGGAAAGATGTGATGTCAAGGCCATTGTCTGATGCTGATCGCATTAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAGGTGACACACAGAGGGAGTGTGAGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCCGTTGATGAGAACTCAACTATGAAATCAGTAGTTGAATACTTTCAAGAGATGTATGGCTTCACCATTCAATATACTCACCTTCCTTGCCTTCAAGTGGGAAACCAAAAGAAGGCCAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAGAGATTGAATGAGAAACAAATTACTGCTCTATTGAAAGTTACTTGCCAGAGACCTCGTGATCGTGAAAATGACATTTTACGGACCATTCAACATAATTCTTACGATCAAGATCCGTATGCAAAGGAATTTGGAATTAAAATCAGTGAAAAACTAGCTTCTGTTGAAGCAAGAATTCTTCCGGCGCCATGGCTTAAATATCACGAAAGTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCATGCATAAATTTTTCACGGAGTGTGCAAGATAGCGTTGCTCGCACATTTTGTAACGAGCTTGCTCAAATGTGTCAAGTATCTGGGATGGAATTTAATCCAGAGCCTGTTATCCCTATCTACAATGCCAAGCCTGAACAGGTGGAGAAAGCTTTGAAACATGTTTACCATGTGTCAGCGAGCAAAACTAAAGGAAAGGAATTGGAGCTTTTGTTAGCAATATTGCCAGACAATAACGGGTGTCTCTATGGTGATATAAAGCGAATTTGTGAGACTGACCTTGGCTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTCAAAATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGATCAACGTGAAGTGGTCACTTGCCCTCCTCTCGGTGCAGATGGGAGGTAGAAATACTGTACTTCTGGATGCTGTGAGCTGCAGAATACCGCTGGTCAGTGACATACCAACCATAATTTTCGGAGCAGATGTAACCCACCCTGAAAACGGCGAAGACTCAAGCCCCTCAATTGCAGCTGTAGTAGCATCTCAGGACTGGCCTGAAGTAACAAAATACGCCGGTTTAGTATGCGCTCAAGCTCATCGGCAGGAACTTATACAAGACTTGTACAAAACTTGGCACGACCCTGTTCGTGGCACAGTTAGTGGAGGCATGATCCGAGATTTACTGGTTTCCTTTAGAAAGGCAACAGGACAAAAGCCGCTACGAATTATATTTTACAGGGATGGTGTCAGCGAAGGGCAATTTTACCAGGTCTTACTTTATGAGTTGGATGCGATTCGGAAGGCATGTGCCTCCTTAGAACCAAATTACCAGCCTCCAGTAACTTTCATAGTCGTGCAAAAAAGACATCATACTCGGCTATTCGCAAACAACCACAGGGATAGAAGCAGTACAGATAGGAGTGGGAATATATTGCCTGGGACTGTTGTTGATTCCAAAATATGCCATCCAACAGAGTTTGATTTTTATCTCTGCAGTCATGCTGGCATCCAGGGTACCAGTCGGCCAGCTCATTATCATGTTCTGTGGGATGAAAATAACTTCACAGCAGATGGAATTCAGTCTTTGACGAACAATCTTTGTTATACATATGCAAGGTGTACACGCTCAGTATCTGTTGTTCCCCCAGCATATTATGCGCATTTAGCAGCCTTTCGAGCCCGTTTCTACATGGAACCAGATATGCAAGATAATGGCTCTACAGGTGACGGTAATGGTCATAGTTCCAAAGGAACACGAGGAGCTGGAGATCATAGTGTGAAGCCATTGCCAGACTTGAAAGAAAATGTGAAGAGAGTGATGTTTTACTGTTAG 2931 0.4374 MPVRQMKESSEQHLVIKPHLQNHMNPAKKTTKAAQNGKGPPPLENDGQALPHSKNKGRRRGRGGRKPDQGDVMMRPRCRPCTATLTSSANGNVENGFISDIGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDHAFKFILSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLVDEEEGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELATKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVMSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNSYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSASKTKGKELELLLAILPDNNGCLYGDIKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKWSLALLSVQMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQDNGSTGDGNGHSSKGTRGAGDHSVKPLPDLKENVKRVMFYC* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02115 976 SUPERFAMILY PAZ domain 307 467 IPR036085 GO:0005515
Lapu7g02115 976 ProSiteProfiles Piwi domain profile. 601 931 IPR003165 GO:0003676
Lapu7g02115 976 SMART Piwi_a_2 601 931 IPR003165 GO:0003676
Lapu7g02115 976 MobiDBLite consensus disorder prediction 935 962 - -
Lapu7g02115 976 Pfam Argonaute linker 1 domain 261 310 IPR014811 -
Lapu7g02115 976 Gene3D - 679 976 IPR036397 GO:0003676
Lapu7g02115 976 MobiDBLite consensus disorder prediction 1 76 - -
Lapu7g02115 976 FunFam Argonaute 10 491 673 - -
Lapu7g02115 976 Pfam PAZ domain 339 443 IPR003100 GO:0005515
Lapu7g02115 976 SMART DUF1785_2 260 312 IPR014811 -
Lapu7g02115 976 Pfam Mid domain of argonaute 510 587 IPR032473 -
Lapu7g02115 976 SUPERFAMILY Ribonuclease H-like 593 932 IPR012337 -
Lapu7g02115 976 Gene3D - 491 672 - -
Lapu7g02115 976 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 106 932 - -
Lapu7g02115 976 CDD PAZ_argonaute_like 312 426 - -
Lapu7g02115 976 Pfam Argonaute linker 2 domain 453 499 IPR032472 -
Lapu7g02115 976 Gene3D paz domain 306 431 - -
Lapu7g02115 976 ProSiteProfiles PAZ domain profile. 313 427 IPR003100 GO:0005515
Lapu7g02115 976 SMART PAZ_2_a_3 317 449 IPR003100 GO:0005515
Lapu7g02115 976 CDD Piwi_ago-like 471 930 IPR045246 -
Lapu7g02115 976 FunFam protein argonaute 10-like 679 976 - -
Lapu7g02115 976 FunFam Protein argonaute-2 306 432 - -
Lapu7g02115 976 Pfam Piwi domain 602 930 IPR003165 GO:0003676
Lapu7g02115 976 Pfam N-terminal domain of argonaute 124 251 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02115 Lapu-Chr7 37461148 37469421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02115 1 976 Eukaryotic Initiation Factors Gene Family AT5G43810 79.722 0.0 1619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02115 K11593 - gmx:100816999 1864.74