Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02101 ATGCCATCTCGACAACTCTCCACGTCACCACCACCTTCTAACCACCGCGTCTTAACTCCTCCGGTTACTTCCACCGCCTCCCTTTGCTCTTTATTCTTTTTACTTTGCCTCTGCTTCCGCAAGCGCAAACGCACCACCCCTTCCTCCGACTCCGACTCCAACCCCCCTCACCCCTTCTCCTACTCCCTCCTACGCCGCGCCACCAACTCCTTCTCCACGCGCCTCGGCCACGGTGGCTTCGGTCCCGTCTTCGCCGGCACCCTCGCCGGCGACCCCGTCGCCGTCAAGCTCATGGACTCCGCTTCCCTGCAGGGCGAGCGCGAGTTCCACAACGAGCTCTTCTTCGCGTCCAGGCTCCGGTCCCCCTCTCTGGTCCCCGCCATCGGCTTCTCCTCCGACCCCAAACGCCGGCGTTTCCTCCTCGTCTACCACCTCATGCACAACGGCAACCTCCACGATGCCCTCTTGCGCTGCAAAACCCCCCACCTAAGGAGCTGGAAAAACCGCTTCTCCATTATCCTCGACATCGCGAAAGGCATCCACTACCTCCACTCCCTCGACCCCCCCGTCATCCACGGCGACATCAAACCCTCCAACATTCTCCTCGACAACTCCTTCTCCGCTAAACTCGCCGACTTCGGCCTTGCGCGCTTAAAACCCCATGTGCAAGAGTTCAAAGCAAAACGCGAGGAGAAGAGAAGGGACGAGTCCGAGAGCGACGGTGGGTCGGAGTTAGAAACTCAGAGCGTCAACACGGAACAATCGTTTGAAGGTAACACTGGGTCGGATTATGTGATGGATTGGATTGGGAAGGAGTTGAAGAAGGAAAGGCCAAAGGCGGTGAAGAAGGGTTCTTCTGGGTCTAGCAGTGGAGTAGTGGAGAAGAAGAAAAGTAGGAAGAAATTGGAATGGTGGGAGACGATGGATGATAGTGGAGTTTTGAAGAAGGAGAAGAAAAGGGCAGCGAGGGAATGGTGGAAGGAGGAGTATTCAGAAGAGCTTGCTAGGAAGACGAAGAAGAAGAAAAAGAAGGAGAAGAAGAAGAAAAAGGGTAGGAACGATGATGGTGATTTGGAGATAGATGATGGTGTGGATTCGTGGTTGAGTGGGGATGTGCATGGAGTTGGATGGAACAGCTACGATTCTGGGACTTGTAGCGGAGAAATAGTAGCCAAGAGTGGTGGTGTTAGTAGTCGGAGTATGAGGGGAACGGTTTTCTACGTTGCTCCTGAGTATGGTCACAATGGGGATGTTTCTGAGAAGTGTGACGTGTACAGTTTCGGGGTTTTGTTGCTTGTCATTGTTTCTGGGAGGAGGCCACTTCAGGTGACAGGGTCGCCCATATCGGAGTTTCAGCGTGCGAATCTGGTGTCTTGGACGAGGCAATGTGCGCGGAGAGGGAAGCTTCTGGAAGTGGTGGATGAGGGTGTTGAGGGGTTGGACAAAGAGCAGGCTAGCCTTTGCGTCACGGTTGCGCTCACTTGTCTGCTAAAGTCACCCGCCCGTCGTCCTTCCATGAAGGAGGTTCTGGGAATGCTGAGTGGGGAGCTGGAGCCTCCGCAGTTGCCGCTTCAGTACTCCCAACACTCTCGCAACACTTTACCCCTCAACTCCAGGAACCAAGGTCGGTGA 1632 0.5509 MPSRQLSTSPPPSNHRVLTPPVTSTASLCSLFFLLCLCFRKRKRTTPSSDSDSNPPHPFSYSLLRRATNSFSTRLGHGGFGPVFAGTLAGDPVAVKLMDSASLQGEREFHNELFFASRLRSPSLVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRCKTPHLRSWKNRFSIILDIAKGIHYLHSLDPPVIHGDIKPSNILLDNSFSAKLADFGLARLKPHVQEFKAKREEKRRDESESDGGSELETQSVNTEQSFEGNTGSDYVMDWIGKELKKERPKAVKKGSSGSSSGVVEKKKSRKKLEWWETMDDSGVLKKEKKRAAREWWKEEYSEELARKTKKKKKKEKKKKKGRNDDGDLEIDDGVDSWLSGDVHGVGWNSYDSGTCSGEIVAKSGGVSSRSMRGTVFYVAPEYGHNGDVSEKCDVYSFGVLLLVIVSGRRPLQVTGSPISEFQRANLVSWTRQCARRGKLLEVVDEGVEGLDKEQASLCVTVALTCLLKSPARRPSMKEVLGMLSGELEPPQLPLQYSQHSRNTLPLNSRNQGR* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02101 543 SMART serkin_6 69 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02101 543 Coils Coil 327 347 - -
Lapu7g02101 543 MobiDBLite consensus disorder prediction 243 261 - -
Lapu7g02101 543 ProSiteProfiles Protein kinase domain profile. 69 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02101 543 MobiDBLite consensus disorder prediction 336 356 - -
Lapu7g02101 543 Gene3D Transferase(Phosphotransferase) domain 1 381 522 - -
Lapu7g02101 543 MobiDBLite consensus disorder prediction 226 263 - -
Lapu7g02101 543 Pfam Protein tyrosine and serine/threonine kinase 71 230 IPR001245 GO:0004672|GO:0006468
Lapu7g02101 543 MobiDBLite consensus disorder prediction 521 543 - -
Lapu7g02101 543 Pfam Protein kinase domain 398 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02101 543 SUPERFAMILY Protein kinase-like (PK-like) 53 528 IPR011009 -
Lapu7g02101 543 MobiDBLite consensus disorder prediction 226 241 - -
Lapu7g02101 543 Gene3D Transferase(Phosphotransferase) domain 1 57 243 - -
Lapu7g02101 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lapu7g02101 543 PANTHER OS07G0586332 PROTEIN 258 541 IPR044576 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02101 Lapu-Chr7 37324945 37327196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02101 392 510 Receptor kinase-like Gene Family AT3G58690 35.484 4.90e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lapu7g02101 PK_Tyr_Ser-Thr 5.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02101 - - pvu:PHAVU_007G064200g 896.345