Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02100 ATGTTTCCTTTACAACGCGGCAATGAGCTGGTGATCCAATTTTCTAATCGTCTCCAACCACAACACAAAATCTCTAAAGATCTGATCCTGGATGATCACGATATCGATAATTCTCCTCTTGTCGCTTGTTCAGATAAAAAATTGCGTACTAGCTGCCCCAACGAACTTTTTTATGCTCCTGACACCAGTCACGCTAATTCTACCGAAGAAGAATATGCAAAAAAGATGGTTCACAGAGACATTGAGAGGCAAAGGAGGCAAGAAATGGCAACCCTTCATGCCTCTCTTAGATCCCTTCTCCCTCTTACCTTTATCAAGGGAAAGCGTTCCATATCTGATCAAATGAACGAGGCAGTGAATTACATAAACCACCTGCAGAAGAATATTAAAGAATTGAGTGACAAGAGGGATAAGCTGAAGAAGAAACTTCCTATAAATTCCACCCTCGAAAGCCGTGAGAACAAGCATGCATCTAGTGGTTTCACTGTCCACCAAAATAGTTATGGAGCTGTGGGGATTGAAATCAGTGGATTCAGTGAGGAAGGGGTTTCACTTTCTAAATTGCTGGAACTAGTGTTAGAAGAGGGACTTGAAGTTGTTACTTGTCTTTCAACTAAAGTCAATGGCAGATTACTGCACAGTTTGCAGTGTGAGGTTGACAATTCCGACAGTGTAGATCTATCTGAGTTGAGAAGAAAATTCTCCAATGTAATTCCATCATTTAGAGTTTCTGAATGA 738 0.4079 MFPLQRGNELVIQFSNRLQPQHKISKDLILDDHDIDNSPLVACSDKKLRTSCPNELFYAPDTSHANSTEEEYAKKMVHRDIERQRRQEMATLHASLRSLLPLTFIKGKRSISDQMNEAVNYINHLQKNIKELSDKRDKLKKKLPINSTLESRENKHASSGFTVHQNSYGAVGIEISGFSEEGVSLSKLLELVLEEGLEVVTCLSTKVNGRLLHSLQCEVDNSDSVDLSELRRKFSNVIPSFRVSE* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02100 245 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 69 236 - -
Lapu7g02100 245 Gene3D - 64 157 IPR036638 GO:0046983
Lapu7g02100 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 73 125 IPR011598 GO:0046983
Lapu7g02100 245 CDD bHLH_AtORG2_like 74 133 - -
Lapu7g02100 245 SMART finulus 79 131 IPR011598 GO:0046983
Lapu7g02100 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 73 145 IPR036638 GO:0046983
Lapu7g02100 245 FunFam Transcription factor bHLH126 65 153 - -
Lapu7g02100 245 Pfam Helix-loop-helix DNA-binding domain 74 126 IPR011598 GO:0046983
Lapu7g02100 245 Coils Coil 115 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02100 Lapu-Chr7 37317628 37318718 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02100 78 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 43.030 8.80e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g02100 HLH 6.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02100 - - pvu:PHAVU_007G064300g 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02100 7 37317628 37318718 Lapu7g02100 7 37317628 37318718 ECH