Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02099 ATGCTCTCAAAAGAGATACTGTATCAACTTGATTACATTCAGGATATCAAAGGTCCTACAGGAAGAGGATATATTATTGAACAAGATCTGATTTCGGGCCAAGAATCACTTGAGGGGAGTGATCCTGGACAGAAAATGGACGAAGAGAATCAGCATATAACATTGGCTACTTCAGACAATGATGAGAAGAAGATTATTCGTAGGGAAGTTGAAAAAAAACGGAGGACAAGAATGTCTGTTCTAGGTTCATCTCTCCGCTCTTCACTCCCTTTCGAACTCGTCAAGGGAAAGCGTTCGGCATCAGATCAAATAGGCGCGGCCGTAAATTATATCCAAAACTTAAAGCAGAAGATTAGTGCTCTCATAGTTAAGAGAGATAGCCTCAAACAAATAGTTGAAACTGAAACTGAACCAGATCACTCAGGAGCAGTAGTAAAGAGTGTCAACATCAATCTCATTCCAGGGGGAGTGGAAATTGCCATATGTAGTGGTTTCGAGGAGAGAAGTTCATATTTATCTGACTTAATGGAAATACTACTTCAAGAAGGATGTGATGTTGTTAGCTGTGTTTCCACTCATGCTAATGGAACTGTATTTCATACTATTAAGTCTCAGGTACCTAGCTAA 627 0.3971 MLSKEILYQLDYIQDIKGPTGRGYIIEQDLISGQESLEGSDPGQKMDEENQHITLATSDNDEKKIIRREVEKKRRTRMSVLGSSLRSSLPFELVKGKRSASDQIGAAVNYIQNLKQKISALIVKRDSLKQIVETETEPDHSGAVVKSVNINLIPGGVEIAICSGFEERSSYLSDLMEILLQEGCDVVSCVSTHANGTVFHTIKSQVPS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02099 208 Gene3D - 54 138 IPR036638 GO:0046983
Lapu7g02099 208 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 48 205 - -
Lapu7g02099 208 Coils Coil 111 131 - -
Lapu7g02099 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 114 IPR011598 GO:0046983
Lapu7g02099 208 Pfam Helix-loop-helix DNA-binding domain 67 114 IPR011598 GO:0046983
Lapu7g02099 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 59 129 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02099 Lapu-Chr7 37305789 37306805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02099 53 206 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 34.104 3.28e-22 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g02099 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02099 - - gmx:100776724 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02099 7 37305789 37306805 Lapu7g02099 7 37305789 37306805 ECH