Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02098 ATGAATCCTTTACACCCTAGTGATGAGTTGTACTTTCAGATTTCAACTGATAATTACTATTCCCTACCAATCCAAACAACCCCTCTAGAAAATCAGATCTTGCATGATCCTGTGATGGATGGTAGTGCTCTCATTCCGTGTACAGGTCAAATGGGAACTACCAAGGGCAAGCAGAGAGAAAAGTTACCTGCTTGGAGAAAGGAAGATTATAAGATCACCACCATAGATGAAAACAAGAAGTCGATGCACAGAGAGACCGAAAAACAAAGAAGGCAAGAAATGACCAGGCTTTGCACCGACTTTAGATCTCTTCTGCCTCTTGAATATATCAAGGGAAAGCGCTCAATTTCTGATCACATGCATGAGGGTACAAATTACATCAAACACCTTGAAAATAAAGTGAAAAAGTTGCAAGCTAAGAGAGACAAGTTTAAGAAGTTGTCCAATTCGAGTCCTGTTGTTTCTGATTGTGGAAGCTCTAACACTGCCCATCTTCCGATATGTGTCATTGTTCATCCTTTTCCAGGAGGTACTCAGATTAAGTGTAGTTATAGCTTCACAAAATATCTTTTTCCTTTGTCAAGAGTGATAGATATGGTGCTTAAAGAAGGGCTTGATGTGGTCAACTGTACCTCAACCAAAACAGATGACAGGTTCATACACATTATCCGATCAGAGGTTACACATATGATGACTGGGACTAATTACACTGAACTGCAAAGGAAACTTGTCCAAGCAATATCATCTTCAAGTTTGGAAGGAGAGACTGTCTGA 774 0.3992 MNPLHPSDELYFQISTDNYYSLPIQTTPLENQILHDPVMDGSALIPCTGQMGTTKGKQREKLPAWRKEDYKITTIDENKKSMHRETEKQRRQEMTRLCTDFRSLLPLEYIKGKRSISDHMHEGTNYIKHLENKVKKLQAKRDKFKKLSNSSPVVSDCGSSNTAHLPICVIVHPFPGGTQIKCSYSFTKYLFPLSRVIDMVLKEGLDVVNCTSTKTDDRFIHIIRSEVTHMMTGTNYTELQRKLVQAISSSSLEGETV* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02098 257 CDD bHLH_AtORG2_like 79 149 - -
Lapu7g02098 257 Pfam Helix-loop-helix DNA-binding domain 79 131 IPR011598 GO:0046983
Lapu7g02098 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 145 IPR036638 GO:0046983
Lapu7g02098 257 Coils Coil 120 147 - -
Lapu7g02098 257 FunFam Transcription factor bHLH126 70 157 - -
Lapu7g02098 257 Gene3D - 71 153 IPR036638 GO:0046983
Lapu7g02098 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 130 IPR011598 GO:0046983
Lapu7g02098 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 68 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02098 Lapu-Chr7 37298545 37299935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02098 76 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 37.640 4.90e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g02098 HLH 2.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02098 - - gmx:100803786 395.971