Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02097 ATGCAGTTTAAATGTTTCAGTTGTTTTCTTTGTGAAAAAGAGCAGCCCGAGATACAAAATGGCAAGGACAAGAAGAAAAGGGACTATCCATGGGAAATATACACCTTGAAGGAGTTGCTTCGTGCAACAAACAATTTTCATCAAGATAACAAGATAGGAGAGGGTGGATTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGAGTCGAGATCGCAGTGAAGCGGTTGAAGACTATGACTGCAAAGGCAGAGATGGAGTTTGCAGTAGAAGTGGAAGTACTAGGAAGGGTGAGGCATAAGAATCTGCTGGGGTTGCGTGGATTCTATGCAGGAGGTGATGAAAGGTTGATTGTGTATGATTACATGCCTAATCACAGTTTGCTCAATCATTTGCATGGTCAACTTGCCACCGATTGTTTGCTAGATTGGCCTAGAAGAATGAGCATAGCAATTGGAGCCGCTGAAGGCTTAGTGTATTTGCACCATGAGGCAAATCCTCACATCATTCATAGAGACATAAAGGCAAGCAATGTTCTTTTAGACTCTGAATTTGAAGCCAAGGTTGCTGATTTTGGCTTTGCTAAGTTGATACCAGAGGGTGTAAGCCATCTCACAACAAGGGTTAAAGGCACCCTTGGATATTTGGCGCCAGAATATGCCATGTGGGGGAAGGTTTCTGAGAGCTGTGATGTTTACAGTTTTGGGATTTTGCTTTTGGAGATTGTGAGTGCCAAGAAACCAATTGAGAAACTCCCTGGCGGAGTGAAAAGGGATATAATTCAGTGGGTTACACCACATGTTCAAAAGGGTAACTTCTTTCATATTGTTGATTCAAAATTAAAGGGACGATTTGATTTAGAGCAGTTGAAATCTGTAATCATGATAGCTTTAAGGTGCACAGATAGTAGTCCAGAAAAAAGGCCTAGCATGGTCCAGGTGGTGGAGTGGCTCAAGGGTGGCACAGGGAGGAGAAAAAAAGAGATTCCAAATTTAACTTGTGGAGATGATAAATATGAAGAAAACAATGGAGAGATTAGAAGAACACAATCCAAGTTGAAAATACCAAATAATGATGATAAACTGAGAATAAGATAA 1095 0.41 MQFKCFSCFLCEKEQPEIQNGKDKKKRDYPWEIYTLKELLRATNNFHQDNKIGEGGFGSVYWGRTSKGVEIAVKRLKTMTAKAEMEFAVEVEVLGRVRHKNLLGLRGFYAGGDERLIVYDYMPNHSLLNHLHGQLATDCLLDWPRRMSIAIGAAEGLVYLHHEANPHIIHRDIKASNVLLDSEFEAKVADFGFAKLIPEGVSHLTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIVSAKKPIEKLPGGVKRDIIQWVTPHVQKGNFFHIVDSKLKGRFDLEQLKSVIMIALRCTDSSPEKRPSMVQVVEWLKGGTGRRKKEIPNLTCGDDKYEENNGEIRRTQSKLKIPNNDDKLRIR* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02097 364 CDD STKc_IRAK 52 319 - -
Lapu7g02097 364 SMART serkin_6 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02097 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Lapu7g02097 364 Gene3D Phosphorylase Kinase; domain 1 11 121 - -
Lapu7g02097 364 SUPERFAMILY Protein kinase-like (PK-like) 28 320 IPR011009 -
Lapu7g02097 364 FunFam PTI1-like tyrosine-protein kinase At3g15890 122 332 - -
Lapu7g02097 364 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524
Lapu7g02097 364 ProSiteProfiles Protein kinase domain profile. 46 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02097 364 Pfam Protein kinase domain 46 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02097 364 FunFam PTI1-like tyrosine-protein kinase At3g15890 18 121 - -
Lapu7g02097 364 Gene3D Transferase(Phosphotransferase) domain 1 122 328 - -
Lapu7g02097 364 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02097 Lapu-Chr7 37289348 37291345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02097 26 319 Receptor kinase-like Gene Family AT5G45780 46.333 2.56e-85 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lapu7g02097 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02097 - - gmx:100817283 672.544