Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02078 ATGTTTTCCACCGACCCACAAACGACCTCGCCGTCGACGGGAGGTTCCCGACCGGCGCTGTCAGACGACGAGGTGTTTCTGGCGGCCAGGCACCCCAAGAAACGAGCCGGGAGGAAGAAGTTCCGGGAGACGCGCCACCCGGTGTACCGCGGCGTCAGGCAGAGGGACTCCGGCAAGTGGGTGTGCGAGGTTCGTGAGCCAAACAAGAAGACCAGGATTTGGCTGGGGACCTTTCTCACGGCGGAGATGGCGGCGCGTGCGCATGACGTGGCCGCCCTCGCGCTTAGGGGGAGGTTTGCCTGCCTCAATTTCGCTGACTCCGCGAATCGGTTGCCAGTGCCAGCGACGGCGGATCCCCGGGACATTCAGAAGGCGGCTGCAGAGGCCGCAGAGGCGTTTCGACCGGGAAATGAATCGGAAAAGAATGATGATGCAGTGGTGGAGACGATGGCGACAGCGACAGAGCATGAAGAAGAAGAAGGGATGGTGCTGGATTACTTGAGAAACATGGTTCTGATGTCGCCGCCGCATTACTTTGAGAGCAATCAACATGGAAGTGCGGACATGGAATTTGAGGATGTTGAAGTTTCTTTATGGAATTACTCATTTTAA 612 0.5784 MFSTDPQTTSPSTGGSRPALSDDEVFLAARHPKKRAGRKKFRETRHPVYRGVRQRDSGKWVCEVREPNKKTRIWLGTFLTAEMAARAHDVAALALRGRFACLNFADSANRLPVPATADPRDIQKAAAEAAEAFRPGNESEKNDDAVVETMATATEHEEEEGMVLDYLRNMVLMSPPHYFESNQHGSADMEFEDVEVSLWNYSF* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02078 203 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 11 201 IPR045277 GO:0003700
Lapu7g02078 203 MobiDBLite consensus disorder prediction 1 17 - -
Lapu7g02078 203 SUPERFAMILY DNA-binding domain 48 107 IPR016177 GO:0003677
Lapu7g02078 203 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Lapu7g02078 203 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Lapu7g02078 203 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Lapu7g02078 203 CDD AP2 49 107 IPR001471 GO:0003700|GO:0006355
Lapu7g02078 203 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Lapu7g02078 203 Pfam AP2 domain 47 97 IPR001471 GO:0003700|GO:0006355
Lapu7g02078 203 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Lapu7g02078 203 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Lapu7g02078 203 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02078 Lapu-Chr7 37057513 37058164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02078 27 201 AP2-EREBP Transcription Factor Family AT5G51990 55.729 1.19e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g02078 AP2 2.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02078 - K09286 gmx:100101894 293.123