Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02077 ATGGATGGCAACCCTTTTGGAAACGTGCCACTGCCACCCCCACCAATACAAGTCCCAGATAACTTCCCTCTCTCTTCCTCCTCTTCGCCAACCCCAACCACGTCCTCTCCGTCTCCCACTCCTTCCAGCGGCGTCCGCTACAGGGGCACGCGGTGCCGTAGCGGGAAGTGGGTGTCGGAGATAAGGGAGCCACGTAAAACCAAGCGCATTTGGCTGGGGACTTACCCGGCAGCGGAAATGGCTGCAGCCGCTTATGATGTCGCGGCTCTCGCGTTGAAGGGTCCTGACACGCCCCTTAACTTCCCCAATTCCATACTCTCGTACCCGATTCCCGCATCATTGTCCGCTACCGATATTCGCGCGGCGGCTGCGGCAGCCGCGCAGGCTAGGCTCGTGAGGGCACCGCAGGAGGGTGGGCAAGTGTTAAACCCTGATATTGGACAGGCGTTGGAGAGGAGTCAGGAGTACTATGACGAGGATGAGTTGTTGAACATGCCGAATTTGCTTGATGACATGGCCAGGGGAATGCAGGTTAGTCCCCCTAGGATCAGTTCCTTTTCTTCTGATGATTCGCCTGGCAATTCTGATGGAGATAACCTTTGGAGTTATACCCTCTGA 618 0.5663 MDGNPFGNVPLPPPPIQVPDNFPLSSSSSPTPTTSSPSPTPSSGVRYRGTRCRSGKWVSEIREPRKTKRIWLGTYPAAEMAAAAYDVAALALKGPDTPLNFPNSILSYPIPASLSATDIRAAAAAAAQARLVRAPQEGGQVLNPDIGQALERSQEYYDEDELLNMPNLLDDMARGMQVSPPRISSFSSDDSPGNSDGDNLWSYTL* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02077 205 SMART rav1_2 46 108 IPR001471 GO:0003700|GO:0006355
Lapu7g02077 205 MobiDBLite consensus disorder prediction 180 205 - -
Lapu7g02077 205 MobiDBLite consensus disorder prediction 21 47 - -
Lapu7g02077 205 Pfam AP2 domain 43 94 IPR001471 GO:0003700|GO:0006355
Lapu7g02077 205 MobiDBLite consensus disorder prediction 1 50 - -
Lapu7g02077 205 ProSiteProfiles AP2/ERF domain profile. 41 102 IPR001471 GO:0003700|GO:0006355
Lapu7g02077 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 31 176 - -
Lapu7g02077 205 Gene3D AP2/ERF domain 43 104 IPR036955 GO:0003700|GO:0006355
Lapu7g02077 205 SUPERFAMILY DNA-binding domain 47 104 IPR016177 GO:0003677
Lapu7g02077 205 MobiDBLite consensus disorder prediction 179 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02077 Lapu-Chr7 37042678 37044275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02077 47 203 AP2-EREBP Transcription Factor Family AT5G52020 58.824 1.02e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g02077 AP2 6.1e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02077 - - gmx:100776717 290.426