Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02068 ATGGGCTTTCTCCGGCGAATTTTCGGCGCCAAAAAGCCTTCGGACACCAAATCCACCAAGAAAAGATGGGCCTTCCTCAAGCCCACCGCCCGGAACAAGTCACTCCCGCCGCCACCGCCCCCAACTGCCTTCAACACCCACTTTGATTCTTCCACTCCCTTGGGCGCCAACAAGCATGCCATCGCCGTAGCCGCCGCCACCGCCGCTGTCGCTGAGGCCGCGCTCGCCGCCGCTCACGCCGCCGCCGAGGTTGTCAGACTTACAAGTGGCGCCGCCGCCGCCGCAGCCACAAGTACCAACACCAGACCCGCCGCGGGGGCGGCGCGTGTTAGCCAGCTGCGGTTGCCGGAGCAGACTGCCGCCGTTAGGATACAGTCGGCGTTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTAAAAGCATTGGTGAAGCTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCTGACATGCTGAGGCGCATGCAAACATTGGTGAGACTTCAGGCCCAGGCACGTGCAAGCCGTGCGCACTTGTCATATAATACGCCTTCTTTCAACTCTTCCCTTTCTCACTACCCTGTCCCTGAAGAATATGAGCACCCACCTCGTGCCCTGAATACAAAATTTGATGGATCTTCTATCCTTAAGAGATGTAGTTCCAATGCCAATTTTAGGAACGTTGACTCAGAACGAACCCCGTTTGATTCGAATTGGTTAAACCGTTGGATGGAATTAGATAACAAGTGCAGGCAAACTGGAGATGCTTCATTGAAAACTGGACGCCAAGATGATGATAAAAGTGACAAGATTCTCGAAGTAGATACTTGGAAACCACACTTCAAGTCTCACCACAGTAGCAGCTCCTTTCAGACAGCACATTATTATTTGAGTTCTGAGTACAATAATAACTCTATGGCACATGAGTCTCCTTCAAAACGTTCAGCAAAGGCTCTAAACCAAAGTTTCTCATCCAGGGAGGTGTTGCAGCTAAACTCTTTGAAGCTTCACAAAGGGAAAGAAGAAGCAACTTCAAGAACTGCTGACAATAGTCCACAAGCATTTTCAGCCAATTCCAGAAATGGAAGTGGTGCAAGGAGGGGTCCCTTCACACCAACCAGGAGTGAGTGCTCCTGGGGTTTCTTCAGTGGCTACACGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTCAAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGCTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCATGTGGTGGGGCCTAATACAGACCAGGATTCAGATTTAAGAAACAAAGTCTTACCTGCCTCTAACAGTGTCAACAGAATTGGGAGTAGTAATTTAAGGTGA 1386 0.5065 MGFLRRIFGAKKPSDTKSTKKRWAFLKPTARNKSLPPPPPPTAFNTHFDSSTPLGANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGAAAAAATSTNTRPAAGAARVSQLRLPEQTAAVRIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHLSYNTPSFNSSLSHYPVPEEYEHPPRALNTKFDGSSILKRCSSNANFRNVDSERTPFDSNWLNRWMELDNKCRQTGDASLKTGRQDDDKSDKILEVDTWKPHFKSHHSSSSFQTAHYYLSSEYNNNSMAHESPSKRSAKALNQSFSSREVLQLNSLKLHKGKEEATSRTADNSPQAFSANSRNGSGARRGPFTPTRSECSWGFFSGYTGHPNYMANTESFQAKVRSQSAPRQRLEFDRYGSTRRPVHVVGPNTDQDSDLRNKVLPASNSVNRIGSSNLR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02068 461 MobiDBLite consensus disorder prediction 342 375 - -
Lapu7g02068 461 Pfam IQ calmodulin-binding motif 120 138 IPR000048 GO:0005515
Lapu7g02068 461 Pfam IQ calmodulin-binding motif 141 158 IPR000048 GO:0005515
Lapu7g02068 461 MobiDBLite consensus disorder prediction 405 442 - -
Lapu7g02068 461 MobiDBLite consensus disorder prediction 350 372 - -
Lapu7g02068 461 ProSiteProfiles IQ motif profile. 117 145 IPR000048 GO:0005515
Lapu7g02068 461 ProSiteProfiles IQ motif profile. 141 168 IPR000048 GO:0005515
Lapu7g02068 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 162 IPR027417 -
Lapu7g02068 461 PANTHER IQ-DOMAIN 5-RELATED 18 433 - -
Lapu7g02068 461 MobiDBLite consensus disorder prediction 1 50 - -
Lapu7g02068 461 Gene3D - 117 168 - -
Lapu7g02068 461 SMART iq_5 139 160 IPR000048 GO:0005515
Lapu7g02068 461 SMART iq_5 116 138 IPR000048 GO:0005515
Lapu7g02068 461 Pfam Protein of unknown function (DUF4005) 355 416 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02068 Lapu-Chr7 36919016 36923774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02068 1 417 IQD Protein Family AT5G62070 45.882 9.30e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02068 - - gmx:100783694 682.174