Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02065 ATGCAAAATTCATCTTCCTTCTACTCCACTCAAAGGAAAATGGAGGGCCCCAGTGAGATGGGTCTCATTGGGGAAAATTTTGATGCTGGTTTGATGGGGAGGCTGAGGGACGATGAGTATGAAAGCCGCTCTGGAAGTGATAACTTCGATGGTGTATCTGGTGATGATCAGGATGGTGGTGATGATCAGCCACAGAGGAAGAAAAGATACCACAGACATACTCCTCACCAAATTCAAGAGCTTGAGTCTTTCTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTCAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAACCGACGAACCCAAATGAAGACACAACTGGAACGCCATGAGAACATAATGCTTAGGCAGGAGAATGATAAGCTCAGAGCTGAGAACAGTCTGATGAAGGAAGCCATGTCAAATCCAGTGTGTAACAGCTGTGGTGGCCCAGCTATTCCTGGCCAGATTTCATTTGAGGAGCACCAGATTAGAATTGAGAATGCTAGACTAAAAGATGAGTTGAACCGTATATGTGCCTTAGCAAACAAGTTCCTTGGCAAGCCAATCTCATCAATGACCAGTCCCATGGCTCTACCAACCTCAAATTCTGGTCTGGAACTTGGTATTGGAAGGAATGGGCTTGGTGGTTCAAGCACTCTTGGCACTCCCTTGCCCATGGGACTTGACTTGGGAGATGGAGTGTTGGGAACTCAAACTGCAATTCCTGGGATTAGACCATCATTGGGGTTGATGGGAAATGAAGTTCAGCTTGAGAGATCCATGCTTATAGATCTTGCATTGGCTGCTATGGAGGAATTGCTAAAGATGACTCAGGCAGAGAGCCCTCTTTGGATCAAGAGTTTGGATGGTGAGAAGGAAGTGTTTAACCATGAGGAGTATGCAAGGTTGTTTTCTCCTTGTATTGGTCCGAAGCCCACTGGTTATGTAACTGAAGCTACAAGAGAAACCGGGATAGTAATCATCAACAGTTTAGCCCTTGTGGAAACTTTGATGGACGCGAATCGATGGGCAGAGATGTTTCCTTCCATGATTGCTAGAGCTATCAACCTCGATGTTATATCCAATGGCATGGGTGGAACAAGAAATGGTGCTCTACAAGTGATGCATGCTGAGGTACAATTGCTTTCACCACTAGTCCCCGTTCGTCAAGTGAGATTCATCCGGTTCTGTAAGCAGCATGCTGAAGGTGTATGGGCTGTGGTTGATGTTTCTATTGATATTGGTCATGATGCTGCTAACGCACAGTCATTCATGAGCTGTAGGAGGCTTCCTTCTGGCTGTATTGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGCTTGAGCATTGGGAGTATGATGAGAGTGTTGTCCACCAACTTTATCGCCCATTGGTAAGTTCTGGTATTGGATTTGGTGCTCATAGATGGATCGCCACTCTCCAAAGACAGTGTGAATGCTTGGCTATCCTCATGTCGTCTTCCATTTCAAGTGATGATCACACAGCATTGAGCCAAGCTGGTCGCAGGAGCATGTTGAAATTGGCACAACGCATGACTAGTAACTTCTGTTCCGGGGTTTGTGCTTCTTCTGCTCGCAAGTGGGACAGGCTTCACATAGGGACTCTTGGTGATGACATGAAAGTGATGACAAGGAAAAACGTGGATGACCCTGGTGAGCCTCCGGGGATCGTGCTTAGCGCTGCAACTTCTGTTTGGATGCCAGTGTCACGGCAAAGGGTGTTTGATTTTCTGCGTGATGAACGGCTGAGAAGTGAGTGGGACATCTTGTCCAACGGTGGACCAATGCAGGAGATGGTACATATTGCCAAAGGACAAGGACATGGAAACTGTGTTTCTCTTCTTCGTGCTAATGCTGTCAATGCGAACGATAGCAGCATGCTGATTCTGCAAGAGACGTGGATGGACGCGTCGTGCTCGGTGGTGGTATATGCACCAGTTGACGTGCAATCACTGAACGTGGTGATGAGTGGGGGAGATTCTGCATACGTTGCACTCTTGCCTTCAGGCTTCGCCATTCTCCCCGATGGTCACTGCAACAACAACAGCACTTGCAACGGGACAATGCAGAAGGGTGGTGGGAGCGAGGACAGCGGGGGAAGCCTTCTCACAGTGGGTTTCCAAATTCTGGTGAACAGTCTCCCAACAGCAAAGCTCACAGTGGAGTCAGTGGACACTGTGAATAACCTCATTTCATGCACCATTCAGAAGATCAAAGGTGCTCTCAGAGTTGCATGA 2298 0.4752 MQNSSSFYSTQRKMEGPSEMGLIGENFDAGLMGRLRDDEYESRSGSDNFDGVSGDDQDGGDDQPQRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRAENSLMKEAMSNPVCNSCGGPAIPGQISFEEHQIRIENARLKDELNRICALANKFLGKPISSMTSPMALPTSNSGLELGIGRNGLGGSSTLGTPLPMGLDLGDGVLGTQTAIPGIRPSLGLMGNEVQLERSMLIDLALAAMEELLKMTQAESPLWIKSLDGEKEVFNHEEYARLFSPCIGPKPTGYVTEATRETGIVIINSLALVETLMDANRWAEMFPSMIARAINLDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQVRFIRFCKQHAEGVWAVVDVSIDIGHDAANAQSFMSCRRLPSGCIVQDMPNGYSKVTWLEHWEYDESVVHQLYRPLVSSGIGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDRLHIGTLGDDMKVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRVFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANAVNANDSSMLILQETWMDASCSVVVYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDGHCNNNSTCNGTMQKGGGSEDSGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIQKIKGALRVA* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02065 765 MobiDBLite consensus disorder prediction 1 74 - -
Lapu7g02065 765 ProSiteProfiles START domain profile. 267 503 IPR002913 GO:0008289
Lapu7g02065 765 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Lapu7g02065 765 Gene3D - 54 140 - -
Lapu7g02065 765 Pfam START domain 277 500 IPR002913 GO:0008289
Lapu7g02065 765 SUPERFAMILY Bet v1-like 528 759 - -
Lapu7g02065 765 CDD START_ArGLABRA2_like 271 499 - -
Lapu7g02065 765 SUPERFAMILY Homeodomain-like 51 124 IPR009057 -
Lapu7g02065 765 ProSitePatterns 'Homeobox' domain signature. 99 122 IPR017970 GO:0000981|GO:0006355
Lapu7g02065 765 FunFam Homeobox-leucine zipper protein HDG1 53 140 - -
Lapu7g02065 765 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 63 762 IPR042160 -
Lapu7g02065 765 FunFam Homeobox-leucine zipper protein GLABRA 2 276 499 - -
Lapu7g02065 765 CDD homeodomain 66 124 IPR001356 GO:0003677
Lapu7g02065 765 SMART START_1 276 500 IPR002913 GO:0008289
Lapu7g02065 765 MobiDBLite consensus disorder prediction 31 45 - -
Lapu7g02065 765 SMART HOX_1 65 128 IPR001356 GO:0003677
Lapu7g02065 765 SUPERFAMILY Bet v1-like 269 500 - -
Lapu7g02065 765 Pfam Homeodomain 67 122 IPR001356 GO:0003677
Lapu7g02065 765 Coils Coil 118 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02065 Lapu-Chr7 36889341 36895005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02065 36 762 Homeobox Transcription Factor Family AT3G61150 61.030 0.0 923
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lapu7g02065 START 3.2e-47 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02065 K09338 - gmx:100785102 1432.16