Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02063 ATGGCTCTTCCCTTCAACCTCGTACTCTCCTACCTCGTCCTGTTCTTGTTGCGTTTTCTGCTTGCCATCGCAGACCAAAACAGCGAGAAGCTTTACCTTCTTTCCTTCAAAGAGGGTCTCCAAAACCCTCACCTGCTTCCCTCGTGGCACCCCGCCACCCCGCACTGCGACTGGGTCGGCGTCACGTGCCAACTCGGCCGAGTCACCTCGCTCTCTCTTCCCAACCGCAACCTCAGAGGAACACTCTCGTCGTCGCTCTTCTCTCTCTCTTCACTCACTCTCCTCAACCTACGTGAAAACCAGCTCTCAGGCGAAATCCCCGGTGAGCTCGGTGGGTTACTTCAGCTCGAAACTCTCCGGCTCGGCTCCAATTCGCTCGCCGGGAATATCCCGCCGGAGGTGGGGCTATTAACGAAGCTATGCACTCTCGACCTCTCCAGCAACTCGCTCGCCGGAGAAGTGCCGGAGAGTGTCGGGAATTTGACCCGGCTTGAGTTTCTCGACCTCAGCAACAATTTTTTATCCGGTTCTCTTCCCGTGAGTCTCTTCGCCGGAGCGAGGTCTTTGATTTCCGTTGATATCTCGAACAACTCCTTTTCCGGCGTAATCCCGCCGGAAATCGGGAACTGGCGGAACATCAGTGCCCTTTACGTGGGGATTAACAAGTTGTCTGGGACTTTGCCGAGGGAGATTGGGTTGCTTACAAAACTTGAAATTTTCTACTCCCCTTCCTGTTCCATCGAAGGTCCTCTGCCAGAGGAAATGGCGAAGCTGAAAGCGTTGACCAAGCTTGACCTTTCTTACAACCCCTTGAGGTGTTCGATTCCCAAGTTCATTGGGGAGCTGGAGAGTCTGAAAATTTTGGACCTTGTGTTTGCGCAGCTTAACGGGTCGGTGCCAGCCGAGCTTGGGAACTGTAAGAATTTGAGGTCTGTGATGCTTTCCTTCAATTCACTCTCTGGGTCTCTGCCTGAGGAGCTTTCTGAGCTTCCCATGTTGACCTTTTCTGCTGAGAAGAATCAGCTTCATGGGCCTTTACCTTCTTGGCTGGGGAAGTGGAGCAATATTGATTCTCTTTTGCTCTCTGCTAACCGTTTTTCAGGGGTGATTCCTCCTGAACTTGGGAATTGCTCTGTGATGGAGCACCTCAGTTTGAGCAGTAATTTGCTGACAGGTCCTATTCCTGAGGAGCTTTGTAATGCTGCCTCACTTTTGGAGGTTGATCTTGATGACAACTTTCTTTCTGGTACTGTTGAGAAAGTGTTTGTCAAGTGTAAGAACCTTACGCAGTTGGTTTTGATGAATAATCGGATTGTTGGTTCTATACCTGAGTACCTTTCAGAGTTACCCTTGATGGTGCTGGACCTTGATTCTAACAATTTTAGTGGGAAAATACCTTCTGGACTGTGGAACTCATTGGCCCTGATGGAATTCTCCGCTGCTAATAACCGTTTGGAGGGTTCTCTTCCTGTGGAGATTGGGAATGCGGTTATGCTGGAGAGGCTTGTTCTTAGCAATAATCGTCTGACAGGTACTATTCCTAAAGAAATAGGGAGACTCTCAAATCTTTCTGTTCTTAACTTGAATGGGAATATGCTTGAAGGGAGTATCCCAACTGAGCTTGGTGGTTGTACTTCCCTCACTACACTGGACCTTGGAAATAATCAGCTGAACGGGTCTATTCCAGAGAAACTGGTTGAACTGAGCCAATTGCAGTGCCTGGTTCTTTCTCACAATAATCTATCTGGGTCTATTCCTGCCAAAAAGTCTTCGTATTTTCGACAGCGTAGCATCCCTGATTTGAGCTTTGTTCAGCATCTTGGTGTGTTTGATCTTTCTCACAATAGATTGTCTGGCCCCATACCCGATGAACTTGGGAGTTGTGTAGTGGTTGTGAATCTATTAGTTAGCCACAACATGCTTTCTGGTAGCATTCCTAAATCACTTTCACGCTTGACGAATCTTACAACTTTGGATTTGTCTGGCAACTTGTTGTCAGGTTCCATTCCACCAGAGCTTGGAGATGTCCTCAAGCTCCAGGGTTTGTATTTGGGACAGAATCAGCTTTCAGGTATCATCCCTCAAAGCTTTGGAAAGTTAAGTAATTTAGTGAAGCTGAATTTGACAGGAAATAAGTTGTCTGGTCCAATTCCTGTCAGTTTTGAGAACATGAAAGGGTTGACTCACCTGGACTTGAGCTCTAATGAGCTCAGTGGTGAGCTTCCTTCCTCACTTTCAGGAGTGCAAAGTCTTGTTGGGATTTACGTGCAGAATAACAGGCTCTCAGGCCAAGTAGGGGAACTCTTCTCAGACTCCATGACATGGAGGATTGAGACAGTGAATTTAAGTGACAATTGCTTCAGTGGGAACTTGCCGTGGTCTTTGGGAAATCTTTCTTACTTGACAAATTTGGATCTTCATGGAAATATGTTGACTGGAGATATTCCTTTAGACCTTGGGGATCTTATGCAACTGGAATATTTTGATGTTTCAGGTAATAAACTATCTGGAAAGATCCCAGACAAGTTATGCGGCCTAGTTAATCTGATTTACCTAGATTTGTCTAGAAACAGGTTGGAAGGGCCGATACCAAGTAATGGTATTTGCCAGAATCTACCCAGAGTTAGACTTGCAGGGAACAGAAACCTTTGTGGCCAGATGTTGGGTATAAATTGTCAGGATAAAAGCATTGGAAGATCAGTATTGTATAATGCATGGCGACTTGCTGCAATTGCGGTTACAATTTTACTGCTAACTCTAAGCATTGCTTTTGTTCTGCATAAATGGATTACCAGGAGGCAAAATAATCCTGAGGAGCTGAAGGAGCGCAAGCTAAACAGTTATGTTGACCACAATCTTTATTTCTTGAGCAGTAGTAGATCAAAGGAGCCATTGAGTATCAATGTTGCAATGTTTGAGCAGCCTCTTCTGAAATTAACTTTGGTGGACATCCTTGAAGCAACTGACAACTTCAGCAAGACAAACATAATTGGAGATGGAGGTTTTGGAACTGTGTACAAGGCCACTTTACCTAATGGAAAAACAGTTGCTGTGAAGAAGCTTAGTGAGGCTAAAACGCAGGGTCATCGTGAGTTCATGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAATCTCGTTGAATTGCTCGGATATTGCTCAATCGGCGAGGAGAAACTCCTTGTTTACGAGTATATGGTAAATGGGAGCTTAGATCTTTGGTTGAGAAATAGGACTGGGGCACTTGAAATCCTGGACTGGAACAAACGATATAAAATCGCAACTGACGCTGCTCGAGGATTAGCTTTCCTTCATCATGGTTTTATACCCCACATCATTCACAGGGATGTTAAAGCTAGCAACATCTTGCTCAATGAAGATTTTGAGCCAAAGGTTGCAGACTTTGGACTGGCTAGACTGATCAGTGCCTGTGAGACTCATATCACCACTGATATTGCTGGAACATTTGGTTACATCCCACCTGAGTATGGTCAGAGTGGGAGATCCACAACAAGAGGAGATGTCTACAGTTTTGGTGTCATTTTGCTTGAACTTGTGACTGGGAAAGAGCCAACAGGACCAGATTTTAAAGAGATTGAAGGTGGTAACTTGGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGACATGCTGCTGATGTTCTTGATCCAACCGTCCTTGATGCTGACTCAAAGCAGATGATGCTTCAGATGCTGCAAATTGCCTGTGTTTGCATATCTGATAATCCTGCAAACAGGCCTAACATGCTTCAAGTGCACAAATTCTTGAAGGGGATGAAGGGAGAGTAG 3810 0.457 MALPFNLVLSYLVLFLLRFLLAIADQNSEKLYLLSFKEGLQNPHLLPSWHPATPHCDWVGVTCQLGRVTSLSLPNRNLRGTLSSSLFSLSSLTLLNLRENQLSGEIPGELGGLLQLETLRLGSNSLAGNIPPEVGLLTKLCTLDLSSNSLAGEVPESVGNLTRLEFLDLSNNFLSGSLPVSLFAGARSLISVDISNNSFSGVIPPEIGNWRNISALYVGINKLSGTLPREIGLLTKLEIFYSPSCSIEGPLPEEMAKLKALTKLDLSYNPLRCSIPKFIGELESLKILDLVFAQLNGSVPAELGNCKNLRSVMLSFNSLSGSLPEELSELPMLTFSAEKNQLHGPLPSWLGKWSNIDSLLLSANRFSGVIPPELGNCSVMEHLSLSSNLLTGPIPEELCNAASLLEVDLDDNFLSGTVEKVFVKCKNLTQLVLMNNRIVGSIPEYLSELPLMVLDLDSNNFSGKIPSGLWNSLALMEFSAANNRLEGSLPVEIGNAVMLERLVLSNNRLTGTIPKEIGRLSNLSVLNLNGNMLEGSIPTELGGCTSLTTLDLGNNQLNGSIPEKLVELSQLQCLVLSHNNLSGSIPAKKSSYFRQRSIPDLSFVQHLGVFDLSHNRLSGPIPDELGSCVVVVNLLVSHNMLSGSIPKSLSRLTNLTTLDLSGNLLSGSIPPELGDVLKLQGLYLGQNQLSGIIPQSFGKLSNLVKLNLTGNKLSGPIPVSFENMKGLTHLDLSSNELSGELPSSLSGVQSLVGIYVQNNRLSGQVGELFSDSMTWRIETVNLSDNCFSGNLPWSLGNLSYLTNLDLHGNMLTGDIPLDLGDLMQLEYFDVSGNKLSGKIPDKLCGLVNLIYLDLSRNRLEGPIPSNGICQNLPRVRLAGNRNLCGQMLGINCQDKSIGRSVLYNAWRLAAIAVTILLLTLSIAFVLHKWITRRQNNPEELKERKLNSYVDHNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKTNIIGDGGFGTVYKATLPNGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVELLGYCSIGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNKRYKIATDAARGLAFLHHGFIPHIIHRDVKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGHAADVLDPTVLDADSKQMMLQMLQIACVCISDNPANRPNMLQVHKFLKGMKGE* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02063 1269 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 26 179 - -
Lapu7g02063 1269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1113 1125 IPR008271 GO:0004672|GO:0006468
Lapu7g02063 1269 Pfam Leucine rich repeat 499 557 IPR001611 GO:0005515
Lapu7g02063 1269 Pfam Leucine rich repeat 653 713 IPR001611 GO:0005515
Lapu7g02063 1269 Pfam Leucine rich repeat 800 859 IPR001611 GO:0005515
Lapu7g02063 1269 Pfam Leucine rich repeat 115 172 IPR001611 GO:0005515
Lapu7g02063 1269 FunFam serine/threonine-protein kinase BRI1-like 2 952 1066 - -
Lapu7g02063 1269 SMART serkin_6 991 1263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g02063 1269 PRINTS Leucine-rich repeat signature 727 740 - -
Lapu7g02063 1269 PRINTS Leucine-rich repeat signature 846 859 - -
Lapu7g02063 1269 Pfam Leucine Rich Repeat 727 747 IPR001611 GO:0005515
Lapu7g02063 1269 SMART LRR_typ_2 846 871 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 161 185 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 676 699 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 258 282 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 724 748 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 798 822 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 89 113 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 520 544 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 652 675 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 137 160 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 545 568 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 700 723 IPR003591 -
Lapu7g02063 1269 SMART LRR_typ_2 604 628 IPR003591 -
Lapu7g02063 1269 FunFam Leucine-rich repeat receptor protein kinase EMS1 334 593 - -
Lapu7g02063 1269 Gene3D Phosphorylase Kinase; domain 1 954 1066 - -
Lapu7g02063 1269 SUPERFAMILY RNI-like 339 583 - -
Lapu7g02063 1269 ProSitePatterns Protein kinases ATP-binding region signature. 997 1020 IPR017441 GO:0005524
Lapu7g02063 1269 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Lapu7g02063 1269 SMART LRR_sd22_2 676 705 - -
Lapu7g02063 1269 SMART LRR_sd22_2 822 848 - -
Lapu7g02063 1269 SMART LRR_sd22_2 544 570 - -
Lapu7g02063 1269 SMART LRR_sd22_2 798 819 - -
Lapu7g02063 1269 SMART LRR_sd22_2 724 750 - -
Lapu7g02063 1269 SMART LRR_sd22_2 161 182 - -
Lapu7g02063 1269 SMART LRR_sd22_2 258 284 - -
Lapu7g02063 1269 SMART LRR_sd22_2 425 448 - -
Lapu7g02063 1269 SMART LRR_sd22_2 652 667 - -
Lapu7g02063 1269 SMART LRR_sd22_2 137 160 - -
Lapu7g02063 1269 SUPERFAMILY RNI-like 70 391 - -
Lapu7g02063 1269 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 600 896 - -
Lapu7g02063 1269 FunFam serine/threonine-protein kinase BRI1-like 2 1067 1269 - -
Lapu7g02063 1269 Gene3D Transferase(Phosphotransferase) domain 1 1067 1269 - -
Lapu7g02063 1269 Pfam Protein tyrosine and serine/threonine kinase 994 1263 IPR001245 GO:0004672|GO:0006468
Lapu7g02063 1269 SUPERFAMILY Protein kinase-like (PK-like) 972 1263 IPR011009 -
Lapu7g02063 1269 FunFam leucine-rich repeat receptor protein kinase EMS1 183 333 - -
Lapu7g02063 1269 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Lapu7g02063 1269 Gene3D Ribonuclease Inhibitor 594 896 IPR032675 -
Lapu7g02063 1269 Gene3D Ribonuclease Inhibitor 185 335 IPR032675 -
Lapu7g02063 1269 Gene3D Ribonuclease Inhibitor 336 593 IPR032675 -
Lapu7g02063 1269 SUPERFAMILY L domain-like 603 885 - -
Lapu7g02063 1269 PANTHER RECEPTOR-LIKE PROTEIN 55 634 1266 - -
Lapu7g02063 1269 ProSiteProfiles Protein kinase domain profile. 991 1263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02063 Lapu-Chr7 36856810 36860778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02063 23 1264 Receptor kinase-like Gene Family AT5G07280 59.936 0.0 1419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Lapu7g02063 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02063 - - vum:124838832 2298.86