Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02062 ATGGCTCCGCCGCTGGAACACAACGGCGACTCCACCAGCGCTGAGTCTCAGAGATCCATTCCGACGCCGTTTCTCACCAAAACCTACCAGCTCGTCGACGATCACACCATCGATGACGTGATTTCCTGGAACGATTCTGGATCATCCTTCATCGTTTGGAACACCACCGTTTTCGCCAGGGATTTGCTTCCTAAATATTTCAAGCACAACAACTTCTCCAGCTTCGTTCGCCAACTCAACACTTACGGATTCAGAAAAGTTGTACCTGATCGGTGGGAATTCTCCAACGAGTGTTTTCGAAGAGGCCAGAAGCGGCTTCTCTGCGAAATTCAGCGACGGAAGATCCTCTCGTCGTCACCGCCAGTCGGAGCAACCGCGACCGTGGCGTTTCCGTCGCCGCTGCCGCTCTCCACGATTCCGACAGCGAAGCCGATCGTGTCGCCGTCGAACTCAACTGAGGAGCAGGTGATCTCGTCCAGCTCGTCGCCGTCCAGGGTGCCGGCAGAGCTGTTGGACGAGAACGAGCGGCTGAGAAAGGAGAACATTCTTTTGACTAAGGAATTGGAAGAGATGAGATCACTCTGCAACAACATATTCAATCTCATGTCGAATTACGCAACAGCTAAAGCGGACGGGGGTGCCGTCGCGGCGAAGACGCTTGGTTTGATGCCGTCAAAGCGGTGCTCCGATGAGGACGCCGTGGAGGAGGTGAATCCGAAGTTGTTTGGGGTGACGATTGGTACGAAGCGAGCGAGACTGGAAGGACGTGGAGCGGATTATGATACGGTTTTGAGTCTGCATCAGTTCCACGCGGACGTGAAATCTGAACCGTTAGATTTCGGAAAACACGGAGAAAACAGAAATACTTCGTGGCTAAATCACTATCGTAGATCAAATGAGAGAGTGTGTAATTGA 915 0.5268 MAPPLEHNGDSTSAESQRSIPTPFLTKTYQLVDDHTIDDVISWNDSGSSFIVWNTTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNECFRRGQKRLLCEIQRRKILSSSPPVGATATVAFPSPLPLSTIPTAKPIVSPSNSTEEQVISSSSSPSRVPAELLDENERLRKENILLTKELEEMRSLCNNIFNLMSNYATAKADGGAVAAKTLGLMPSKRCSDEDAVEEVNPKLFGVTIGTKRARLEGRGADYDTVLSLHQFHADVKSEPLDFGKHGENRNTSWLNHYRRSNERVCN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02062 304 PRINTS Heat shock factor (HSF) domain signature 24 47 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02062 304 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02062 304 PRINTS Heat shock factor (HSF) domain signature 62 74 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02062 304 MobiDBLite consensus disorder prediction 145 167 - -
Lapu7g02062 304 SUPERFAMILY "Winged helix" DNA-binding domain 21 113 IPR036390 -
Lapu7g02062 304 Coils Coil 174 194 - -
Lapu7g02062 304 SMART hsfneu3 20 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02062 304 Pfam HSF-type DNA-binding 24 113 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02062 304 ProSitePatterns HSF-type DNA-binding domain signature. 63 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g02062 304 Gene3D - 16 114 IPR036388 -
Lapu7g02062 304 FunFam Heat stress transcription factor B-4 16 114 - -
Lapu7g02062 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 15 204 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02062 Lapu-Chr7 36851364 36852944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02062 2 304 HSF AT5G62020 48.936 1.82e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lapu7g02062 HSF_DNA-bind 2.3e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02062 K09419 - gmx:100780987 469.159