Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02045 ATGGTTAGCCAAAGGCAGCGACTGGCTCGGAAGCGATTCAAAGGGGAGCACCCCGAACTGTTTCCGAAGGCCGAGCCCACACCCCCCAAAGACCCTAGCAAGAAGAAGAAGAAGAAGAGTAGCGCGTTCAAACGCAAACGGGCCGAGGCCAAACCCGGCTCCAGGAAAAAGCACCCTCTTAGAGTCCCCGGCATGAAGCCCGGAGAGAGCTGCTTCATCTGCAATGCCAAAGACCATATCGCCAAGCTCTGTCCCCAAAAGACCGAATGGGAAAAAAACAAGATATGTTTGCGGTGTCGTCGACGCGGCCATAGAGCAAAGAACTGCCCCGAGGTGCAAGATGCCGCCAAGGATGTCAAATATTGCTATAACTGTGGGGAAACTGGCCACTCTCTCTCACTGTGTCCGCACCCTCTTCAGGAAGGAGGGACAAAGTTTGCTGAGTGCTTTGTCTGTAATCAACGGGGACACTTGAGTAAAAACTGTCCTCAAAATACTCATGGCATTTATCCAAAGGGTGGTTGCTGTAAAATATGTGGTGGTGTGACACATTTGGCAAAAGATTGTCCTGACAAAGGAAGGCAAGGATCTGTTGCTGCTAATGGCCCTGTTGGTAGATCAATGAGAATTGAAGAGAGGCCCGGGGCCCAGGTTACCAAGTTTATTAGCGGGGATGATATTGAGGATGACTTCATGATAGATGACATACATAGTGGCGACAATAACAAGTCAGCAAAGTCCAAGGACGGCAATGTTAAACCAAAGAAGAAGGATCCTAAAGTTGTGAACTTTAACTAA 798 0.4912 MVSQRQRLARKRFKGEHPELFPKAEPTPPKDPSKKKKKKSSAFKRKRAEAKPGSRKKHPLRVPGMKPGESCFICNAKDHIAKLCPQKTEWEKNKICLRCRRRGHRAKNCPEVQDAAKDVKYCYNCGETGHSLSLCPHPLQEGGTKFAECFVCNQRGHLSKNCPQNTHGIYPKGGCCKICGGVTHLAKDCPDKGRQGSVAANGPVGRSMRIEERPGAQVTKFISGDDIEDDFMIDDIHSGDNNKSAKSKDGNVKPKKKDPKVVNFN* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02045 265 MobiDBLite consensus disorder prediction 234 265 - -
Lapu7g02045 265 SUPERFAMILY Retrovirus zinc finger-like domains 117 166 IPR036875 GO:0003676|GO:0008270
Lapu7g02045 265 ProSiteProfiles Zinc finger CCHC-type profile. 122 136 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 SUPERFAMILY Retrovirus zinc finger-like domains 64 112 IPR036875 GO:0003676|GO:0008270
Lapu7g02045 265 Pfam Zinc knuckle 149 164 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 Pfam Zinc knuckle 121 137 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 SMART c2hcfinal6 95 111 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 SMART c2hcfinal6 175 191 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 SMART c2hcfinal6 121 137 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 SMART c2hcfinal6 70 86 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 MobiDBLite consensus disorder prediction 12 32 - -
Lapu7g02045 265 MobiDBLite consensus disorder prediction 33 61 - -
Lapu7g02045 265 FunFam Zinc finger CCHC-type-containing 9 146 198 - -
Lapu7g02045 265 ProSiteProfiles Zinc finger CCHC-type profile. 96 111 IPR001878 GO:0003676|GO:0008270
Lapu7g02045 265 PANTHER OS04G0555800 PROTEIN 1 265 - -
Lapu7g02045 265 Gene3D - 64 118 - -
Lapu7g02045 265 MobiDBLite consensus disorder prediction 1 62 - -
Lapu7g02045 265 Gene3D - 119 169 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02045 96 192 C2H2 Transcription Factor Family AT5G20220 28.947 2.56e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02045 - - gmx:121174300 421.009