Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02042 ATGCAAGCTCCAACAACACTCACCGGATTGCTGCACCGCGTCGCCGGAATATTCCCTTCCCACCGTGCCGTCTCCGTCTCAGGCAAATTTGACCTCACACACTCCCGCCTCCACCACCTCGTCGAACGCGCTGCCGCGCGCCTTCTCTCCGCCGGCATCAAACCCGGCGATGTCGTCGCACTCACCTTCCCCAACACCGTCGAGTTTATAATAACGTTTCTGGCCATTATTCGAGCGCGAGCCGCGGCGGCGCCGTTGAACGCGGCTTACACAGCGGACGAGTTCGAGTTTTATTTATCCGACTCAGAGTCAAAGCTTTTAATAACATCGATAGAAGGGAACGGGCCGGCTCAAGCCGCAGCTTCCAAGCTTAGCATTCCGGTATCAACAGCTTCGCTCGCCGAAGCCGAAGCCGAAGAGCTCAGTCTCTCTCTGAGTAACACAGAGTCACCGACCGACTCGATTTCCAAACTCGCCAATGACGCGTCCGACGTGGCACTGTTCCTCCACACTTCCGGAACCACGAGCCGTCCCAAAGGCGTGCCGTTGACGCAGCACAACTTGGCCTCATCGGTGGAGAACATCAAGTCCGTGTACAGACTAACGGAGTCTGACTCGACCGTCATCGTTCTTCCATTGTTCCACGTCCACGGGTTACTCGCCGCGTTGCTGAGTTCTCTCGCCGCTGGCGCCTCTGTTGCACTCCCGGCGGCGGGGAGGTTCTCCGCCTCCTCGTTTTGGAGCGACATGTTGACGTACAACGCCACATGGTACACCGCGGTTCCTACGGTGCACCAAATCGTGTTGGAGCGTCATTTGAAAACCCCGGAACCGGTTTACCCGAAGCTCCGGTTTATTCGGAGCTGTAGTGCCTCGCTTGCACCGGTTATACTGGAGCGGTTGGAGGAGGCGTTTGGGGCACCGGTTTTGGAGGCTTATGCTATGACGGAAGCGTCGCATTTGATGTCGACGAATCCGTTACCCGAAGATGGGCCTCATCGGGCCGGGTCGGTTGGAAAGCCCGTGGGCCAGGAAATGGCAATATTAGACGAAAAGGGTGAGATTGTAAAGAATGGTGTTAAAGGTGAGGTTTGTATTAGGGGACCCAATGTGACCAAAGGGTATAAAAATAACCCTGATGCCAATTTTTCTGCCTTTCAATATGGGTGGTTCCACACCGGTGATATCGGGTATTTTGATTCGGATGGATATTTGCACCTCGTGGGTCGCATCAAGGAGCTTATTAACCGTGGAGGGGAGAAAATATCACCAATAGAGGTGGATGCTGTCCTTCTATCTCATCCAGGCGTCGCCCAAGCAGTTGCATTTGGAGTTCCAGATGATAAGTATGGTGAAGAGATAAATTGTGCGATCATCCCAAAAGAAGGATCAAACATTGATGAGGCAGAGGTGCAGAGATTTAGCAAGAAGAACCTTGCAACCTTCAAAGTCCCTAAAAAGGTGTTCATCACTGATTCTTTGCCCAAGACCGCCACTGGGAAGATTCTAAGGCGTCTTGTAGCAGAACACTTCGCTTCTCAAACTTGA 1548 0.5329 MQAPTTLTGLLHRVAGIFPSHRAVSVSGKFDLTHSRLHHLVERAAARLLSAGIKPGDVVALTFPNTVEFIITFLAIIRARAAAAPLNAAYTADEFEFYLSDSESKLLITSIEGNGPAQAAASKLSIPVSTASLAEAEAEELSLSLSNTESPTDSISKLANDASDVALFLHTSGTTSRPKGVPLTQHNLASSVENIKSVYRLTESDSTVIVLPLFHVHGLLAALLSSLAAGASVALPAAGRFSASSFWSDMLTYNATWYTAVPTVHQIVLERHLKTPEPVYPKLRFIRSCSASLAPVILERLEEAFGAPVLEAYAMTEASHLMSTNPLPEDGPHRAGSVGKPVGQEMAILDEKGEIVKNGVKGEVCIRGPNVTKGYKNNPDANFSAFQYGWFHTGDIGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPGVAQAVAFGVPDDKYGEEINCAIIPKEGSNIDEAEVQRFSKKNLATFKVPKKVFITDSLPKTATGKILRRLVAEHFASQT* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02042 515 Pfam AMP-binding enzyme C-terminal domain 426 501 IPR025110 -
Lapu7g02042 515 PANTHER ACYL-COA SYNTHETASE 17 514 - -
Lapu7g02042 515 CDD FACL_fum10p_like 19 509 IPR045310 GO:0016874
Lapu7g02042 515 Gene3D - 411 514 IPR045851 -
Lapu7g02042 515 Gene3D - 6 410 IPR042099 -
Lapu7g02042 515 ProSitePatterns Putative AMP-binding domain signature. 168 179 IPR020845 -
Lapu7g02042 515 Pfam AMP-binding enzyme 15 417 IPR000873 -
Lapu7g02042 515 FunFam Peroxisomal-coenzyme A synthetase 6 410 - -
Lapu7g02042 515 SUPERFAMILY Acetyl-CoA synthetase-like 5 513 - -
Lapu7g02042 515 FunFam 4-coumarate--CoA ligase 2 413 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02042 Lapu-Chr7 36660128 36664782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02042 5 514 Monolignol Biosynthesis Gene Families AT4G05160 31.939 4.75e-63 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02042 K22133 - gmx:100783685 869.766