Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02034 ATGTCAGAATCTGAGGAAGAAAATACAGACTATGTTCCAAGGTCAAAGCCTGCAGAGGAAGCTGGCTGCACCATGGACTTCGATCTGGACTTAGAAACTTCATGGCCTTTGGATCACATGGCCTTTGTCTCCAATCCCATGTCACCTTTTCTGTTCTCCTCCACCTCTGACCAGCCTTACTCTCCTCTATGGGCTTTCTCTGATGGAGAAGACCCCAAGCTTCCAGCTTCTGCCTTCTCTGATTGCCACAAGATCTTCCCTTGTGATTCAAATTCAATAGCTGAAAAGCCAGTGGAGAATGATGACAACAAGAAGCTTTTGCCACCACTTGCGCCTATGCCACCAATGGAAAATGTGGACGGATATTGTGTAATCAAGGAAAGGATGACACAAGCGCTCCGATACTTCAAAGAGTTGACTGAATTGAATGTTCTGGCTCAAGTTTGGGCACCTGTGCGGAATGGTAATCGGTATGTACTTACAACTTCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCATCAGTATAGAACGGTCTCTCTGATGTACATGTTTGCTGTGGACGGGGAGAATGATGGAAGTTTGGGACTCCCTGGTCGGGTTTTTCAGCAGAAATTACCAGAATGGACTCCCAATGTTCTGTATTATTCTAGTAAAGAGTATCCACGCCGAGATCATGCTCAACATTACAATGTTCGTGGATCTTTGGCTTTGCCCGTGTTTGAGCCCGCATTGCAGTCATGTGTTGGTGTATTGGAGTTGATAATGACTTCCCAGAAGATTAACTATGCTCCCGAGGTTGATAAAATCTGCAAAGCCCTTGAGACAGTAAATTTGAGGAGCTCCGAAATTTTGGACCATCCATACACTCAGATATGTAATGAAGGCCGTCAGAATGCTTTATCAGAGATCTTGGAGATATTGACAGTGGTGTGTGAAACTCATAATTTACCTCTGGCCCAAACATGGATTCCCTGTAAGCATCGGAGTGTCTTGGCCCAAGGTGGTGGTGTAAAGAAAAGTTGTTCTAGTTTTGATGGTAGCTGCATGGGGAAAGTTTGCATGTCTACAACTGACATAGCCTTCTATATTATAGATGCTCATTTATGGGGTTTCCGTGAGGCCTGTGTTGAGCATCACTTACAACAAAGTCAAGGTGTTGCTGGGAGGGCTTTTTTGTCCCACAGCATGTGCTTCTGTTCAAACATCACCCAATTCTGCAAAACTGATTACCCCTTAGTGCACTATGCTCTCATGTTTGGTTTAACAAGCTGTTTTTCAATATGTTTACGAAGCTCTCATACAGGAAGTGATGATTATGTATTAGAGTTTTTTCTGCCTCCTAGGATCACAGACTTTCATGAACAAAAGACTTTGTTGGCATCCATATTGGCAACAATGAAACAGCATTTCCGGAGTCTTAAGATTGCTTCTGGTGTTGAACTTGAGGATGGTTCAATTGAAATTATTGAAGCAACAATTGAAAGAATTCACACGAGGCTTGAATCTATTCCAATTGCCCCATCTACTAAATCACCACGTAGACCAGATACTTCACCAAATATGGAGGAGGAAGCCCCTCAGGATCCATCAGAACAACACATATTGATGTACTGTAATGGTATCAATCATGAAGCGCATCTCAGTGATAAAGCAGGAGGAAAAATTGATCATATGATTACTTTAGAGACTAAAAACTTGAAGAAACCCTTAGAGAGGAAACGTGGAAAAACTGAGAAATCAATCAGTCTTGAAGTCTTGCAACGATATTTTGCTGGGAGTCTAAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACCACAATGAAGCGCATCTGTAGGCAGCATGGGATATCGCGTTGGCCATCTCGAAAGATCAACAAGGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCTGTCCAGGGTGCTGAAGGAGCATTTGGTTTGAATTCTCTCAGCACAAGTCCACTTCCCATTGCTGTTGGTTCCCTTCCTGAGTCCTCTACTCCAAACAAGTTCAGCCAGCCAGTCTCAATGAGCATTAGACCATCAGAGCTTCAGATGAGAGTGAATGAATTGAATGCCTCCAAAGAATTAGAGACAAACAGACAAGCTGGAATGGAAGATCAATTGCTAGGAGGAAGGATACAGAATCTTGAGAGAGTTATTAATGATAAAGGAGGTTCTACTCAGGAGGTTGGGAAAGAACCAAAGAGGACTAGAACTGGGAGTGGCTCGAGTGAAGACAGCACAAATCCTACTTCTCACGGTTCATGGCATGATAGTCCCCCAAATGAAAGTTCACCTGTAAAAGATATATTCATTACTTCCAACCATGATCAATGTGCTGTGCTAAGGAGATCACCAGAGTCAACACTGCAGCCAACCACTAATATACCGAACCGGCCTACTTCTTACCCTATGCCTGAATTTGTGGCTGCAGAACTTCGAGAACCATTTGGAGGGATGCTAATAGAGGATGCTGGTAGTTCTAAAGACTTAAGAAATTTGTGTCCTTCAGTAGCTGAGGCCATTTTGGAGGATCTGGTTCCTGAAGCGTGTGGGACTAATCCTCCAGCTTTAGATTTGTCTCCCAAGCAAAGCATGGGTACTCCTAAAAAAGCAGTGACACCTTTTGCAGCTACAAAAGAAATGAAAACTGTGACTATCAAGGCAACATACAGGGAAGATATCATAAGATTCCGGGTCTCATTGACATGTGGCATTGTGGAACTTAAAGAAGAAGTTGCCAAAAGATTGAAACTAGAGGTGGGTACATTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATAGCCTGTGATGCAGACCTGCAGGAGTGCATGGATGTCTCTAGATCATCAGGAAGCAACATAATCAGGGTTTTGGTGCATGACATAACGTCCAATCTTGGAAGCTCATGTGAGAGCTCGGGGGAGTGA 2967 0.4334 MSESEEENTDYVPRSKPAEEAGCTMDFDLDLETSWPLDHMAFVSNPMSPFLFSSTSDQPYSPLWAFSDGEDPKLPASAFSDCHKIFPCDSNSIAEKPVENDDNKKLLPPLAPMPPMENVDGYCVIKERMTQALRYFKELTELNVLAQVWAPVRNGNRYVLTTSGQPFVLDPHSNGLHQYRTVSLMYMFAVDGENDGSLGLPGRVFQQKLPEWTPNVLYYSSKEYPRRDHAQHYNVRGSLALPVFEPALQSCVGVLELIMTSQKINYAPEVDKICKALETVNLRSSEILDHPYTQICNEGRQNALSEILEILTVVCETHNLPLAQTWIPCKHRSVLAQGGGVKKSCSSFDGSCMGKVCMSTTDIAFYIIDAHLWGFREACVEHHLQQSQGVAGRAFLSHSMCFCSNITQFCKTDYPLVHYALMFGLTSCFSICLRSSHTGSDDYVLEFFLPPRITDFHEQKTLLASILATMKQHFRSLKIASGVELEDGSIEIIEATIERIHTRLESIPIAPSTKSPRRPDTSPNMEEEAPQDPSEQHILMYCNGINHEAHLSDKAGGKIDHMITLETKNLKKPLERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNSLSTSPLPIAVGSLPESSTPNKFSQPVSMSIRPSELQMRVNELNASKELETNRQAGMEDQLLGGRIQNLERVINDKGGSTQEVGKEPKRTRTGSGSSEDSTNPTSHGSWHDSPPNESSPVKDIFITSNHDQCAVLRRSPESTLQPTTNIPNRPTSYPMPEFVAAELREPFGGMLIEDAGSSKDLRNLCPSVAEAILEDLVPEACGTNPPALDLSPKQSMGTPKKAVTPFAATKEMKTVTIKATYREDIIRFRVSLTCGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECMDVSRSSGSNIIRVLVHDITSNLGSSCESSGE* 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02034 988 ProSiteProfiles RWP-RK domain profile. 571 652 IPR003035 -
Lapu7g02034 988 Gene3D - 890 974 - -
Lapu7g02034 988 PANTHER PROTEIN NLP8 57 987 IPR045012 GO:0003700
Lapu7g02034 988 Pfam RWP-RK domain 584 632 IPR003035 -
Lapu7g02034 988 SMART PB1_new 893 975 IPR000270 GO:0005515
Lapu7g02034 988 MobiDBLite consensus disorder prediction 728 778 - -
Lapu7g02034 988 ProSiteProfiles PB1 domain profile. 893 975 IPR000270 GO:0005515
Lapu7g02034 988 MobiDBLite consensus disorder prediction 750 778 - -
Lapu7g02034 988 FunFam RWP-RK domain-containing protein 890 974 - -
Lapu7g02034 988 SUPERFAMILY CAD & PB1 domains 889 978 - -
Lapu7g02034 988 Pfam PB1 domain 893 974 IPR000270 GO:0005515
Lapu7g02034 988 CDD PB1_NLP 894 974 IPR034891 -
Lapu7g02034 988 MobiDBLite consensus disorder prediction 506 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02034 Lapu-Chr7 36533599 36538399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02034 259 988 NLP Transcription Factor Family AT4G24020 52.838 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lapu7g02034 PB1 2.9e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02034 - - gmx:100786118 1803.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00600 4 6410433 6416694 Lapu7g02034 7 36533599 36538399 PCT