Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02029 ATGCCAGTTGCAAAACTCCCGGCCTCAGGCACAACCGGTTTCACAAAAACAGATGATGGAAATGATTCTTTAGATACAATATTCAGACAAGCAATTGGAAAAGAACCTTTGCTTTCCTTTCCTAGGGCCGGTGACAGCCCAGTACAGTGGATTCAATTACTTCATGCTTTAGATCAGCAAGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGATTCAGTTACAAAAGTGCAACAAGTGTTCTCGAGAATTTTGCTCTCCTATTAACTATAGAAGACATATACGTGTGCAGCACCGGTTGAAAAAGCTTGATAAGGATTCTAAAAAGAATAGGGAACTTTTAGGGGCATATTGGGATAAGCTCCCTGTAGAAGAGGCAAAGGAGGTTGTGTCATTCAAGAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAGAAGCTTTGACAACCCTTAGAAAACAAGGATTTTCTTCTCTTCCACAATATTATCTGAGGGCTGGTTCTGCCCTTTTGAATATTGTTCAATCCAGGCCTTCTAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATCCTAGATGATTCTAGTGAAAAAACATTTTTGGTTGGATCAGCAGTGTCAATGCAAAGATATGTTTTTGATGGAGAGGCCGGAAAGATTGGTCTTGAGCAAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAACTGGTGAAGGCCTGGCTCGCTGACAAGGATGCTGAAGCATTGAGATGCCAAAAGCTTCTTGTGGAAGAGGAAGAAGCTGCTCAAAAAAGAAAAGCTGAGATTTTAGAGAGGAAACGCCAGAAAAAGCTTAGACAGAAAGAACACAAAGCAAAGGAACAAATCGAAGACGACACAGAAATTAAAGGGAACATAAGCAGCGCAGGAGAGGATGTATCACCAGCAGATGCATCTTTGGGTATTTGTGACTTCGATGGACATAATCCAGATATATTTGCGAATCAATCTCCTTCTCCGCCACATGTAACTTCTCATTGCCTAGACTCTAGTGAAATTATAGAAGGGGATACACTGTCAGGGTATGATTGTGACACTGATCAGTATATAGAGCGGCAGATATTACAAGGACATAATCGCCGGGGCACAATGCCTGCCAGATGGCAAGGGCTACCAAAATCACAATGGGCTAGAGCCAATGGTTTGAATGCCGGCCAGAATTCTCAACTGTCGAAGCTTGGAGTTATTCAAAAGCATAGAACCGGCCATGATCTTAGGGTAGCCCCTATAGTTAATGGTAGTAAGGTTTGGAGTCGAAAACCTAAAGCAGAAACTAATGGTTTGGTTCTAAAAACCAAACTGCAGAAAGAACCAGACAAAGTTAAGAATCATGAAGTTTTGATAGGATCTGTATCAGTTAGTCTGGGTAATTGCTGCCATTCCGGAGGTAACTCTATGGCACCCCAGCGGGACTGCTTGGTAGGGAATCTGCCCAAGCTGAATACTGCTCAGGAGAAACCAGGAAGCAACGGTCGTTTAACAGTTAAGCTTTGGAGGCCTGTAAGCCAGCATGGAACTAAAGACCCATTGCCACTTCAAACTGGTGGGACAGAAGCTGATGTTATTAATGGAAAAGTTGATGAAAATTCATCTGGTCAAAGTAGTTTAAGGATGTGTAGTGTAGAGGGTAGTGATATTGATTTTGGGGACAATTTTTCCCATAATGTGGCAAAAGTAGATTCAGAAAGCTTACGTCTATCCAGCCATGCTGCAAAATCCTTTCTTGCACAAAGATGGAAAGAAGCTATCTCCTCAAACCATGTAAAATTGGTTTTCACGCCTGATTTTGAGCCTCGGGGAGGACAGCACGGACAGGATTGTGAACTAGCAGCTTATTCATCTTCCGATGCGGATAGATGTGGCATTCTTGAAAGTACAGAGAACCAAGTGCCTGCAACCTCTGGAGTAGCAAGGTCTAAATCCAAAACAAAGCCTGAAAAAGGAATGAAGATAAAGTACATTCCCAAACAAAAAGCAGCAGACTAG 2040 0.425 MPVAKLPASGTTGFTKTDDGNDSLDTIFRQAIGKEPLLSFPRAGDSPVQWIQLLHALDQQELPGWPLLSPVKIQLQKCNKCSREFCSPINYRRHIRVQHRLKKLDKDSKKNRELLGAYWDKLPVEEAKEVVSFKNVMLEEVPGSSILEALTTLRKQGFSSLPQYYLRAGSALLNIVQSRPSSFPISSQELFSILDDSSEKTFLVGSAVSMQRYVFDGEAGKIGLEQKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQKRKAEILERKRQKKLRQKEHKAKEQIEDDTEIKGNISSAGEDVSPADASLGICDFDGHNPDIFANQSPSPPHVTSHCLDSSEIIEGDTLSGYDCDTDQYIERQILQGHNRRGTMPARWQGLPKSQWARANGLNAGQNSQLSKLGVIQKHRTGHDLRVAPIVNGSKVWSRKPKAETNGLVLKTKLQKEPDKVKNHEVLIGSVSVSLGNCCHSGGNSMAPQRDCLVGNLPKLNTAQEKPGSNGRLTVKLWRPVSQHGTKDPLPLQTGGTEADVINGKVDENSSGQSSLRMCSVEGSDIDFGDNFSHNVAKVDSESLRLSSHAAKSFLAQRWKEAISSNHVKLVFTPDFEPRGGQHGQDCELAAYSSSDADRCGILESTENQVPATSGVARSKSKTKPEKGMKIKYIPKQKAAD* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02029 679 Coils Coil 272 292 - -
Lapu7g02029 679 MobiDBLite consensus disorder prediction 658 679 - -
Lapu7g02029 679 MobiDBLite consensus disorder prediction 642 679 - -
Lapu7g02029 679 MobiDBLite consensus disorder prediction 642 657 - -
Lapu7g02029 679 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 104 IPR013087 -
Lapu7g02029 679 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Lapu7g02029 679 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02029 Lapu-Chr7 36496883 36503271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02029 19 676 C2H2 Transcription Factor Family AT4G25610 43.158 5.41e-151 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lapu7g02029 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02029 - - gmx:100799153 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02029 7 36496883 36503271 Lapu7g02029 7 36496883 36503271 ECH
Lapu4g00607 4 6489264 6491491 Lapu7g02029 7 36496883 36503271 PCT