Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02018 ATGTCGTCGCCGGGCTTCCCTGGTGCTGGACCCCCCGATTTCTACGGCGGAGCAACCGGTTTCCCTAGTCAATCCATGGCGGTTCAACCCACCATCAAGAACCACCCGGCCACCACTCACCACCCTCTCTACCGATCCCAACCTTCAATTTTGCTTCACCCCTCCTCTCACATACCCCAACGCCAAACACCCACTCTCATCGGGAAACGCACCCTCGCGGATTTCCAGACCCACAACCTCAGCGCTAACAACAACAACAACAACCTTCTTATTAGCAACAACAACAACCTTCTTATTAGCAACAACAACAACCTTCTTATTAACAACAACAACAACCAACTCCTTCCTAACTATCTACTTCGTTCCGTAAAGCCCAGAACTGTTCAACGCAACCATTTCTCCTCGTTGTCTCCTGAATTATCTGCCTTTTCGTCGCAACGTTACGCCGCGTCCCTTCTCCAACACATTCGCCCTAACGCCGTTAACGCACAACCAGTCACGACTTCGATCCTGTCCCACACAAATTTCTCTCCGGTTCACAGCAGTCTAAACGAAACCCGCGGACTGGAGAAGGTCTCAATAGACCACCGCCTCCAGGAGTTGGAAAAGCAGCTTCTAGAAGACAATGATGACGACCAAGGCGACGACGTTTCAGTCGTAACCACCTCTGAATGGTCTCACACAATACAGAACTTAATCACTCCGCACAAACGCGCGTCGTCTTCGCCCACTTCGTCGACGACGTCCTCCAACTCCTCCGCAGAATCCATCACCGCCAAACAGTCCCTAACGGAGGTCGCGAAAGCGATTTCAGAAAGGAGATTCGATGCCGCGACGCAGATCCTATCCCGATTATCACAGAATTCGGATCAACGCTTCGTAAGTTGCATGGTTTCTGCGCTCAAGTCGCGGATGAGTCGCGTTGAGTATCCAGCACCGGTTGCGGAATTGTTCAGCGGGGAACATGCCGAGTCGACTCAGTTGTTATTTGAACACTCGCTCTTCTTTAGGGTTGCGCTCCTGGTTGCCAACATCGCAATCCTCGAATCCGCATTCGAAGATAAAACAGAGAACGCGAAACTATGCGTGGTGGATTTCGACATCGGCAACGGGAAAAAATACTCGAGCCTTCTTCACGAGCTCTCCTTGCGGAGGAAGGGCGCCAAGGCCGTCGTCAAGATCATCGCCGTGGCAGAGAACGGCGCTGACGAGAGTCTGAGTACCGCAGGCGCGATGCTGGGAAGACTGGCAGAACAACTCGGGATTGGTTTCGAATTCAAAGTGTTGAGTCGGAAACTCGGCGATTTGACTCGCGAGTCGCTGGGTTGCGACGCGGACGATGCGCTGGCGGTGAACTTCGCGTTCAAGCTTTACAGAATGCCCGACGAGAGTGTCTCCACGGAGAACCCCCGCGACGAACTTCTGCGGCGCGTGAAGGCACTGGCACCGCGCGTGGTGACGCTGGTGGAGCAGGAGGCAAACACGAATACGGCGCCGTTCGTGGCTCGCGTGGCCGAGTTGTGTGCGTATTACGGCGCGCTGTTTGACTCCCTTGAGACGACGATGTCAAGGGAGAACGCTGGGCGAATTAAGATTGAGGAGGGACTGAGTAGGAAGGTGGCGAACTCGGTGGCGTGCGAAGGAAGAGACCGTGTGGAAAGGTGCGAGGTGTTCGGGAAGTGGCGCGCCCGCATGGGCATGGCTGGGTTCAGATTGAAGCCACTGAGTCAGAGAGTAGCTGAGTCAATCAAAGAGCGACTCCGTGGTGAGAACAGAGTTGCAGTAAAAGTGGAGAATGGTGGGATTTGCTTTGGCTGGATGGGAAGAACTCTCACCGTGACTTCTGCTTGGTGTTAA 1857 0.5401 MSSPGFPGAGPPDFYGGATGFPSQSMAVQPTIKNHPATTHHPLYRSQPSILLHPSSHIPQRQTPTLIGKRTLADFQTHNLSANNNNNNLLISNNNNLLISNNNNLLINNNNNQLLPNYLLRSVKPRTVQRNHFSSLSPELSAFSSQRYAASLLQHIRPNAVNAQPVTTSILSHTNFSPVHSSLNETRGLEKVSIDHRLQELEKQLLEDNDDDQGDDVSVVTTSEWSHTIQNLITPHKRASSSPTSSTTSSNSSAESITAKQSLTEVAKAISERRFDAATQILSRLSQNSDQRFVSCMVSALKSRMSRVEYPAPVAELFSGEHAESTQLLFEHSLFFRVALLVANIAILESAFEDKTENAKLCVVDFDIGNGKKYSSLLHELSLRRKGAKAVVKIIAVAENGADESLSTAGAMLGRLAEQLGIGFEFKVLSRKLGDLTRESLGCDADDALAVNFAFKLYRMPDESVSTENPRDELLRRVKALAPRVVTLVEQEANTNTAPFVARVAELCAYYGALFDSLETTMSRENAGRIKIEEGLSRKVANSVACEGRDRVERCEVFGKWRARMGMAGFRLKPLSQRVAESIKERLRGENRVAVKVENGGICFGWMGRTLTVTSAWC* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02018 618 ProSiteProfiles GRAS family profile. 250 618 IPR005202 -
Lapu7g02018 618 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 237 611 IPR005202 -
Lapu7g02018 618 Pfam GRAS domain family 260 617 IPR005202 -
Lapu7g02018 618 MobiDBLite consensus disorder prediction 231 258 - -
Lapu7g02018 618 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02018 Lapu-Chr7 36399357 36401973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02018 118 617 GRAS Transcription Factor Family AT5G52510 47.425 2.97e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu7g02018 GRAS 3.6e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02018 - - vra:106769615 894.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02018 7 36399357 36401973 Lapu7g02018 7 36399357 36401973 ECH
Lapu4g00653 4 8166293 8168703 Lapu7g02018 7 36399357 36401973 PCT