LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g02014	ATGAACACCGTATTCTTCATACCCTTTCTCACACCCTTTATCCTTCTCCTTCTCCTTCTCATACCCTTCTCAATATCATTCTCTCCCACAGATAACTTCCTTCTCAGTTGTGGATCACACAACAATGCTTCCCTCTTCAACAGAGACTTCATGGGCGATTCCACCAACCCAGGTTCCATTTTTCTCTCTTCAGATGATTCTGTTTCACTCGCATACCAAAAGCCACCTCAGAATTTGCCTAGTTTGTACCGCACAGCAAGAGTTTTCAGCAGCACTGGGAGGTACAGGTTCAACATGAAGAAAAACGGCACCCACTTGGTGCGTTTTCATTTCTCCCCCTTCAAGGCTCAAAGTTTTGATCTAAAATCAGCAAAATTTAGTGTCTTTGTTAATGGGGTTTCGGTGCTGAGCAATTTCCAGCCACCTAATGATGTGCTTCTCAAAGAGTTTATTCTAAACATAGAGTCAAACTTTCTTGAGATTTTGTTCAGGCCTGTTGGTGACTCAGGTTTTGCCTTTGTCAATGCTTTGGAGGTGTTTACTGCCCCTGTGGATTTTGTTATAGATTTTGGAGCCAGGTTGGTTGGTCCTTCTGGGGTGGAAGAGTATAGAAACCTTTCTTCTCAGGTTTTGGAAACTGTTCATAGGATCAATGTTGGGGGTTTGAAAATAACTCCTTTCAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGATTATTTGGTGTTTAAGGGTGCTGCAAAGCCTGCAGTGAGCACTCATATACCAAATTATCAGAAGGGAGGTGCAACTAGAGAGATTGCACCTGAAAATGTTTACATGACTGCTCAGCAGATGAATAGGGAAAACTCAAGTTTGGCTTCAAAGTTCAACATAACCTGGAACTTCCCTGTGTCTTCTGGTGGTGTTCCACACTTGGTTCGGTTGCATTTCTGTGATATTGTCAGTCCTGCTCTCAACTTGCTCTACTTTGATGTGTACATTAATGGGTACATTGCCTACAAGGATCTTGATTTGTCAGCGCTTTCCATCCACACGCTTGCATCACCTGTCTATGTGGATTTTGTTACAAATTCAGATGACTCGGGTTTTGTTCAAGTGAGTGTTGGTCCTTCTGAGCTGAGCAGTTCCATAAGGATGAATGCCATATTGAATGGTGCAGAGATAATGGAGATGGTCAATGATGTCAGTACTAATGTTGTGCATAGAAGGAAGAATTTGTGGGTGTTGGTGGGTTCAATTGTTGGAGGAATTGCTGTCTTATTTTTAGTTGTAACTGCTTTTCTACTTGGTACCAAATGCAGGAACAAGAAACCAAAACAGAGGACATTGGAAAGTGTTGGATGGACACCTTTAAGCATGTTTGGAGGAAGTTCCCTCAGTAGAAGCTCTGAGCCTGGTTCTCATGGACTTCTTGGCTTGAAGATCCCTTTTGCTGAAATACAAACAGCAACAAACAACTTCGATAGAAATTTGATTATAGGGTCAGGTGGGTTTGGTATGGTCTACAAGGGAGTGTTCAGAGACAATACGAAGGTTGCTGTCAAGAGAGGCATGCCAGGGTCCAGACAAGGCCTTCCCGAGTTCCAAACTGAGATAACAGTTTTGTCCAAAATTCGCCATCGCCACCTTGTTTCACTAGTTGGTTTCTGTGAAGAAAATTCAGAAATGATACTTGTGTATGAGTACGTTGAAAAGGGTCCACTGAAGAAGCATTTATATGGCTCATCACGACAACCACCTCTCTCTTGGAAGCAGCGTCTTGAAATATGCATTGGTGCGGCCAGAGGTCTTCACTATCTTCACACAGGCTTTGCTCAAGGAATCATCCACCGTGACATTAAATCAACAAACATACTGCTTGATGAAGACTATGTGGCCAAGGTTGCTGACTTTGGTCTTTCAAGGTCAGGACCATGCATCAATGAAACACATGTGAGTACTAATGTGAAAGGTAGTTTTGGTTATCTTGATCCTGAGTATTACCGGAGACAGCAGCTTACGGATAAGTCAGATGTTTATTCTTTTGGTGTTGTGCTTTTTGAGGTTCTTTGTGGGAGACCTGCTGTTGATCCACAATTAGCAAGAGAACAGGTGAATTTGGCAGAATGGGCACTGGAATGGCTGAAGAAAGGCATGCTGGAGAAAATTGTCGACCCCCATCTTGTTGGACAGATCCAACAAGACTCCTTAAAAAAATTTTGTGAAACTGCAGAGAAATGTTTGGCTGAGTATGGGGTTGACAGGCCAGCTATGGGTGATGTCTTATGGAATTTGGAGTATGCACTTCAGCTTCAAGAAAGTGGACAACAAAGGGAGCCACATGCCAACACTAGTGCTAGTGAATCTGTTAGTGTGACCAATACAGTTATTCCTGGAAATCCTTCTACCAACACAAGAGCAGAGAGGGATTATGATAATTTTTCTTCAGATGTAAGTACTAGCCAAGTGTTTTCCCAGCTAATGAACAATGAAGGCAGATAG	2487	0.4274	MNTVFFIPFLTPFILLLLLLIPFSISFSPTDNFLLSCGSHNNASLFNRDFMGDSTNPGSIFLSSDDSVSLAYQKPPQNLPSLYRTARVFSSTGRYRFNMKKNGTHLVRFHFSPFKAQSFDLKSAKFSVFVNGVSVLSNFQPPNDVLLKEFILNIESNFLEILFRPVGDSGFAFVNALEVFTAPVDFVIDFGARLVGPSGVEEYRNLSSQVLETVHRINVGGLKITPFNDTLWRTWIPDEDYLVFKGAAKPAVSTHIPNYQKGGATREIAPENVYMTAQQMNRENSSLASKFNITWNFPVSSGGVPHLVRLHFCDIVSPALNLLYFDVYINGYIAYKDLDLSALSIHTLASPVYVDFVTNSDDSGFVQVSVGPSELSSSIRMNAILNGAEIMEMVNDVSTNVVHRRKNLWVLVGSIVGGIAVLFLVVTAFLLGTKCRNKKPKQRTLESVGWTPLSMFGGSSLSRSSEPGSHGLLGLKIPFAEIQTATNNFDRNLIIGSGGFGMVYKGVFRDNTKVAVKRGMPGSRQGLPEFQTEITVLSKIRHRHLVSLVGFCEENSEMILVYEYVEKGPLKKHLYGSSRQPPLSWKQRLEICIGAARGLHYLHTGFAQGIIHRDIKSTNILLDEDYVAKVADFGLSRSGPCINETHVSTNVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLCGRPAVDPQLAREQVNLAEWALEWLKKGMLEKIVDPHLVGQIQQDSLKKFCETAEKCLAEYGVDRPAMGDVLWNLEYALQLQESGQQREPHANTSASESVSVTNTVIPGNPSTNTRAERDYDNFSSDVSTSQVFSQLMNNEGR*	829

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu7g02014	828	Gene3D	-	32	185	-	-
	Lapu7g02014	828	Gene3D	-	210	395	-	-
	Lapu7g02014	828	PANTHER	OS07G0166700 PROTEIN	476	767	IPR045272	GO:0004714\|GO:0006468
	Lapu7g02014	828	CDD	STKc_IRAK	495	761	-	-
	Lapu7g02014	828	FunFam	Putative receptor-like protein kinase	32	183	-	-
	Lapu7g02014	828	ProSiteProfiles	Protein kinase domain profile.	489	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g02014	828	FunFam	receptor-like protein kinase FERONIA	458	564	-	-
	Lapu7g02014	828	Gene3D	Transferase(Phosphotransferase) domain 1	565	788	-	-
	Lapu7g02014	828	MobiDBLite	consensus disorder prediction	769	810	-	-
	Lapu7g02014	828	FunFam	Receptor-like protein kinase FERONIA	210	395	-	-
	Lapu7g02014	828	Gene3D	Phosphorylase Kinase; domain 1	462	564	-	-
	Lapu7g02014	828	Pfam	Protein tyrosine and serine/threonine kinase	494	690	IPR001245	GO:0004672\|GO:0006468
	Lapu7g02014	828	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	610	622	IPR008271	GO:0004672\|GO:0006468
	Lapu7g02014	828	SMART	serkin_6	489	763	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu7g02014	828	FunFam	Receptor-like protein kinase FERONIA	565	780	-	-
	Lapu7g02014	828	Pfam	Malectin-like domain	35	392	IPR024788	-
	Lapu7g02014	828	ProSitePatterns	Protein kinases ATP-binding region signature.	495	517	IPR017441	GO:0005524
	Lapu7g02014	828	SUPERFAMILY	Protein kinase-like (PK-like)	477	758	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g02014	Lapu-Chr7	36360604	36363573	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g02014	13	828	Receptor kinase-like Gene Family	AT3G46290	48.272	0.0	727

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Lapu7g02014		Malectin_like	3.5e-32	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g02014	-		-	gmx:100801169	1501.49