Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02010 ATGGTATCTAAAAACCCCAATCCCTCTGAGGCTTTCTACATGGACCCTTCTGCTATGTCGCTCCCCGGAATCCTCCCTTTTGCCGCTGCTGCCACGGCCGCCGATTCGCTTGAGGACCCTGCTAAGAAGACTCGCAAACCTTACACCATCACCAAGTCTAGGGAGAGTTGGACCGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAATTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACGGTTATCCAGATACGTAGCCATGCTCAGAAATACTTTCTAAAAGTTCAGAAGAATGGGACAAGTGAACATCTTCCTCCGCCCAGACCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCAAAAAATGTTCCAGTGCTCTCACAAGTATCAGGATCCTTTCAGTCTTCATCGGCTTTGCTTGAACCGGGATACATAATAAAGCATGATTCTTCAGCAATGCTTAAAACTCCTATTATTAACACTGCAGTGTCTTCCTGGTCAAACAACTCTCTGCAGAAAACCACCAATTTATTGCATGGGCACAAAGTGAATAATTGTTGCAGTAACAGTGGAAGTCCTAGAGCACAGTTGGTTGGTGAATCAAATGGTCAAGGGAATAATATCCCTCCACCGAGAGTTCTTCCAGATTTTGGTGAAGTATACGGCTTCATTGGGAGTGTATTTGATCCAAATGTAACTGGACATCTACAGAAACTAAGACAGATGGACCCTATAGATGTCGAGACGGTGCTATTGTTGATGAGAAACCTGTCAATCAATTTAGCAAGCCCAGATTTTGAGGACCATAGAAGGCTGCTTGCATCATATGAGGTGGAACCTGAGTCAGATAACTATTACATCAGTGCAGATCGAAACATGCTTGATGTTCAGTTGAAGAGTGTTACTTAG 936 0.438 MVSKNPNPSEAFYMDPSAMSLPGILPFAAAATAADSLEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYIIKHDSSAMLKTPIINTAVSSWSNNSLQKTTNLLHGHKVNNCCSNSGSPRAQLVGESNGQGNNIPPPRVLPDFGEVYGFIGSVFDPNVTGHLQKLRQMDPIDVETVLLLMRNLSINLASPDFEDHRRLLASYEVEPESDNYYISADRNMLDVQLKSVT* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02010 311 MobiDBLite consensus disorder prediction 104 128 - -
Lapu7g02010 311 PANTHER SWI/SNF COMPLEX-RELATED 35 271 - -
Lapu7g02010 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Lapu7g02010 311 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Lapu7g02010 311 SMART sant 53 101 IPR001005 -
Lapu7g02010 311 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Lapu7g02010 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Lapu7g02010 311 CDD SANT 56 99 IPR001005 -
Lapu7g02010 311 FunFam protein REVEILLE 6 isoform X1 56 104 - -
Lapu7g02010 311 ProSiteProfiles SANT domain profile. 52 105 IPR017884 -
Lapu7g02010 311 Gene3D - 57 104 - -
Lapu7g02010 311 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02010 Lapu-Chr7 36332711 36337642 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu7g02010 Myb_DNA-binding 3.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02010 - - gmx:100794389 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g02010 7 36332711 36337642 Lapu7g02010 7 36332711 36337642 ECH