Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu7g02010 | ATGGTATCTAAAAACCCCAATCCCTCTGAGGCTTTCTACATGGACCCTTCTGCTATGTCGCTCCCCGGAATCCTCCCTTTTGCCGCTGCTGCCACGGCCGCCGATTCGCTTGAGGACCCTGCTAAGAAGACTCGCAAACCTTACACCATCACCAAGTCTAGGGAGAGTTGGACCGAACCCGAACACGACAAGTTCCTCGAAGCTCTTCAATTATTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACGGTTATCCAGATACGTAGCCATGCTCAGAAATACTTTCTAAAAGTTCAGAAGAATGGGACAAGTGAACATCTTCCTCCGCCCAGACCAAAAAGAAAAGCTGCTCATCCATATCCTCAGAAAGCTTCAAAAAATGTTCCAGTGCTCTCACAAGTATCAGGATCCTTTCAGTCTTCATCGGCTTTGCTTGAACCGGGATACATAATAAAGCATGATTCTTCAGCAATGCTTAAAACTCCTATTATTAACACTGCAGTGTCTTCCTGGTCAAACAACTCTCTGCAGAAAACCACCAATTTATTGCATGGGCACAAAGTGAATAATTGTTGCAGTAACAGTGGAAGTCCTAGAGCACAGTTGGTTGGTGAATCAAATGGTCAAGGGAATAATATCCCTCCACCGAGAGTTCTTCCAGATTTTGGTGAAGTATACGGCTTCATTGGGAGTGTATTTGATCCAAATGTAACTGGACATCTACAGAAACTAAGACAGATGGACCCTATAGATGTCGAGACGGTGCTATTGTTGATGAGAAACCTGTCAATCAATTTAGCAAGCCCAGATTTTGAGGACCATAGAAGGCTGCTTGCATCATATGAGGTGGAACCTGAGTCAGATAACTATTACATCAGTGCAGATCGAAACATGCTTGATGTTCAGTTGAAGAGTGTTACTTAG | 936 | 0.438 | MVSKNPNPSEAFYMDPSAMSLPGILPFAAAATAADSLEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPQKASKNVPVLSQVSGSFQSSSALLEPGYIIKHDSSAMLKTPIINTAVSSWSNNSLQKTTNLLHGHKVNNCCSNSGSPRAQLVGESNGQGNNIPPPRVLPDFGEVYGFIGSVFDPNVTGHLQKLRQMDPIDVETVLLLMRNLSINLASPDFEDHRRLLASYEVEPESDNYYISADRNMLDVQLKSVT* | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu7g02010 | 311 | MobiDBLite | consensus disorder prediction | 104 | 128 | - | - | |
Lapu7g02010 | 311 | PANTHER | SWI/SNF COMPLEX-RELATED | 35 | 271 | - | - | |
Lapu7g02010 | 311 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 52 | 101 | IPR006447 | GO:0003677 | |
Lapu7g02010 | 311 | ProSiteProfiles | Myb-like domain profile. | 49 | 99 | IPR001005 | - | |
Lapu7g02010 | 311 | SMART | sant | 53 | 101 | IPR001005 | - | |
Lapu7g02010 | 311 | Pfam | Myb-like DNA-binding domain | 54 | 99 | IPR001005 | - | |
Lapu7g02010 | 311 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 49 | 103 | IPR017930 | - | |
Lapu7g02010 | 311 | CDD | SANT | 56 | 99 | IPR001005 | - | |
Lapu7g02010 | 311 | FunFam | protein REVEILLE 6 isoform X1 | 56 | 104 | - | - | |
Lapu7g02010 | 311 | ProSiteProfiles | SANT domain profile. | 52 | 105 | IPR017884 | - | |
Lapu7g02010 | 311 | Gene3D | - | 57 | 104 | - | - | |
Lapu7g02010 | 311 | SUPERFAMILY | Homeodomain-like | 48 | 104 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu7g02010 | Lapu-Chr7 | 36332711 | 36337642 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Lapu7g02010 | Myb_DNA-binding | 3.8e-10 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu7g02010 | - | - | gmx:100794389 | 518.85 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu7g02010 | 7 | 36332711 | 36337642 | Lapu7g02010 | 7 | 36332711 | 36337642 | ECH |