Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu7g02005 | ATGGATGAGGACTGGGATCTCTTTGCCATCGTCCGAAGCTGCCAATCAGCCACCAATACTTCCACCACACCAATTCCCCAAACCACCACCAATAATACTTCCTCTTCTTTCCTCACTTCCATTGTCCAGGAAGACAAATTCGATGTATTTTCCTTTCCCAATACAGTGGAACCCATAGCCAATGAGTTTCATGAGCTACATCAATTGTTTTCACCCTTTAACCCCACCACCACCAACACCACTACCCCTAGTGCTCCTGGCATCAATCCTAATTCCCCTTATTTTGCAGAACAGGAAACTCAGCCAATTAGTGACCACCTCCCCATTTGGCCTCATTTTGTGCCAGAATCCTCCACTCCCAGTTTCAGTAGATTCCCTGACCATCAACAACAGCAACAGAATCAACTTCCGGTACTTCAGAAACAGGAATTTCATGCACCCCAAAATAATTCTCCCGCAGTTTCACCAAACACACAACCTCAAACATCCAAATCAAGAAAAAGAAAAAACCAACAGAAGAAAATGGTGTGTCAGGTAGCCGCGGATAACCTCTCGGCAGATTTGTGGGCATGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCATACCCGAGGAATTACTATAGGTGTAGCAGCTCTAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAAACCGACATGTTCATCGTTACGTACACCGGAGACCACTCGCATCCCCGGCCAACCCACCGGAACTCGCTCGCCGGAAGTACCCGAAGTAAGAATCCGACTACGAATCCGCCGCCGTTACCCGGGTCACTCTCCTTTCATGCCGCCCCCTTTTCTTCTTCTTCTTCTTCTCCACCACACTCTCCAACGTCGCCATCGGAAGATCCACCGGAAACCGGCGACGTTGAACCCGACCCGGACATCGAAACTGATGTGGACGATGACAGTGACATTAGATGA | 963 | 0.4818 | MDEDWDLFAIVRSCQSATNTSTTPIPQTTTNNTSSSFLTSIVQEDKFDVFSFPNTVEPIANEFHELHQLFSPFNPTTTNTTTPSAPGINPNSPYFAEQETQPISDHLPIWPHFVPESSTPSFSRFPDHQQQQQNQLPVLQKQEFHAPQNNSPAVSPNTQPQTSKSRKRKNQQKKMVCQVAADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTETDMFIVTYTGDHSHPRPTHRNSLAGSTRSKNPTTNPPPLPGSLSFHAAPFSSSSSSPPHSPTSPSEDPPETGDVEPDPDIETDVDDDSDIR* | 321 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu7g02005 | 320 | SMART | WRKY_cls | 185 | 245 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu7g02005 | 320 | MobiDBLite | consensus disorder prediction | 146 | 176 | - | - | |
Lapu7g02005 | 320 | MobiDBLite | consensus disorder prediction | 146 | 165 | - | - | |
Lapu7g02005 | 320 | FunFam | WRKY transcription factor 22 | 168 | 239 | - | - | |
Lapu7g02005 | 320 | SUPERFAMILY | WRKY DNA-binding domain | 182 | 246 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu7g02005 | 320 | Gene3D | WRKY domain | 168 | 239 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu7g02005 | 320 | MobiDBLite | consensus disorder prediction | 299 | 320 | - | - | |
Lapu7g02005 | 320 | ProSiteProfiles | WRKY domain profile. | 180 | 246 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Lapu7g02005 | 320 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 4 | 300 | IPR044810 | GO:0003700 | |
Lapu7g02005 | 320 | MobiDBLite | consensus disorder prediction | 237 | 320 | - | - | |
Lapu7g02005 | 320 | MobiDBLite | consensus disorder prediction | 275 | 289 | - | - | |
Lapu7g02005 | 320 | Pfam | WRKY DNA -binding domain | 187 | 244 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu7g02005 | Lapu-Chr7 | 36287633 | 36288800 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu7g02005 | 164 | 309 | WRKY Transcription Factor Family | AT5G52830 | 61.905 | 4.38e-58 | 189 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Lapu7g02005 | WRKY | 3.8e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu7g02005 | - | - | gmx:100792164 | 416.772 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Lapu10g00164 | 10 | 3463845 | 3465398 | Lapu7g02005 | 7 | 36287633 | 36288800 | ECH | |
Lapu1g01508 | 1 | 27850222 | 27852313 | Lapu7g02005 | 7 | 36287633 | 36288800 | ECH | |
Lapu10g00531 | 10 | 7619508 | 7635540 | Lapu7g02005 | 7 | 36287633 | 36288800 | ECH | |
Lapu7g02005 | 7 | 36287633 | 36288800 | Lapu7g02005 | 7 | 36287633 | 36288800 | ECH |