Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02005 ATGGATGAGGACTGGGATCTCTTTGCCATCGTCCGAAGCTGCCAATCAGCCACCAATACTTCCACCACACCAATTCCCCAAACCACCACCAATAATACTTCCTCTTCTTTCCTCACTTCCATTGTCCAGGAAGACAAATTCGATGTATTTTCCTTTCCCAATACAGTGGAACCCATAGCCAATGAGTTTCATGAGCTACATCAATTGTTTTCACCCTTTAACCCCACCACCACCAACACCACTACCCCTAGTGCTCCTGGCATCAATCCTAATTCCCCTTATTTTGCAGAACAGGAAACTCAGCCAATTAGTGACCACCTCCCCATTTGGCCTCATTTTGTGCCAGAATCCTCCACTCCCAGTTTCAGTAGATTCCCTGACCATCAACAACAGCAACAGAATCAACTTCCGGTACTTCAGAAACAGGAATTTCATGCACCCCAAAATAATTCTCCCGCAGTTTCACCAAACACACAACCTCAAACATCCAAATCAAGAAAAAGAAAAAACCAACAGAAGAAAATGGTGTGTCAGGTAGCCGCGGATAACCTCTCGGCAGATTTGTGGGCATGGCGAAAATACGGACAAAAACCAATTAAGGGTTCTCCATACCCGAGGAATTACTATAGGTGTAGCAGCTCTAAAGGTTGTATGGCTCGAAAACAAGTTGAACGGAGTAACACTGAAACCGACATGTTCATCGTTACGTACACCGGAGACCACTCGCATCCCCGGCCAACCCACCGGAACTCGCTCGCCGGAAGTACCCGAAGTAAGAATCCGACTACGAATCCGCCGCCGTTACCCGGGTCACTCTCCTTTCATGCCGCCCCCTTTTCTTCTTCTTCTTCTTCTCCACCACACTCTCCAACGTCGCCATCGGAAGATCCACCGGAAACCGGCGACGTTGAACCCGACCCGGACATCGAAACTGATGTGGACGATGACAGTGACATTAGATGA 963 0.4818 MDEDWDLFAIVRSCQSATNTSTTPIPQTTTNNTSSSFLTSIVQEDKFDVFSFPNTVEPIANEFHELHQLFSPFNPTTTNTTTPSAPGINPNSPYFAEQETQPISDHLPIWPHFVPESSTPSFSRFPDHQQQQQNQLPVLQKQEFHAPQNNSPAVSPNTQPQTSKSRKRKNQQKKMVCQVAADNLSADLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCMARKQVERSNTETDMFIVTYTGDHSHPRPTHRNSLAGSTRSKNPTTNPPPLPGSLSFHAAPFSSSSSSPPHSPTSPSEDPPETGDVEPDPDIETDVDDDSDIR* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02005 320 SMART WRKY_cls 185 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g02005 320 MobiDBLite consensus disorder prediction 146 176 - -
Lapu7g02005 320 MobiDBLite consensus disorder prediction 146 165 - -
Lapu7g02005 320 FunFam WRKY transcription factor 22 168 239 - -
Lapu7g02005 320 SUPERFAMILY WRKY DNA-binding domain 182 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g02005 320 Gene3D WRKY domain 168 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g02005 320 MobiDBLite consensus disorder prediction 299 320 - -
Lapu7g02005 320 ProSiteProfiles WRKY domain profile. 180 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g02005 320 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 300 IPR044810 GO:0003700
Lapu7g02005 320 MobiDBLite consensus disorder prediction 237 320 - -
Lapu7g02005 320 MobiDBLite consensus disorder prediction 275 289 - -
Lapu7g02005 320 Pfam WRKY DNA -binding domain 187 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02005 Lapu-Chr7 36287633 36288800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02005 164 309 WRKY Transcription Factor Family AT5G52830 61.905 4.38e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu7g02005 WRKY 3.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02005 - - gmx:100792164 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu10g00164 10 3463845 3465398 Lapu7g02005 7 36287633 36288800 ECH
Lapu1g01508 1 27850222 27852313 Lapu7g02005 7 36287633 36288800 ECH
Lapu10g00531 10 7619508 7635540 Lapu7g02005 7 36287633 36288800 ECH
Lapu7g02005 7 36287633 36288800 Lapu7g02005 7 36287633 36288800 ECH