Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g02002 ATGGAACACCAATCACCACCGCCGCCGCCACCCTTGCCACCAAAAACCTACACTCTAACCGCCACCTCTATATGCTACACCAAGTCCTCCTCCACCAAACTACCTCCACTCTTCAACCATTGCACCACCCCTCCACCCTACATCCTCAAGGACATCTCCCTCACCGCCCACCCCTCCCAAATCCTCGCCGTCGTTGGCCCCAGTGGCGCTGGTAAGTCCACCCTCCTGGACATCCTCGCCGCCCGTACCCTCCCCTCCCATGGCACCCTCTCCCTCAACTCCTCCCCTCTCATCCCCTCCTCCTTCCGCAAGCTCTCCTCCTACGTCCCCCAACACGACCACTCCCTCCCTCTCCTCACCGTCTCCGAAACATTCCTCTTCGCCGCCACCCTCCTCAAACCCTCCGCCCCCAACCTCCCTTCCCTCGTCTCCCAACTCCTCTCCCAACTCCGTCTCTCCCATCTTGCCCACACCCGCCTCTCTCACGGCCTCTCCGGTGGCGAACGCAGAAGGGTCTCCATTGGTCTCAGCCTCCTCCACGATCCCGCCGTGTTACTCCTCGACGAACCCACTTCGGGGCTTGACAGCACTTCCGCTTTCAAAGTCATGCAGATTCTCAAACAAACTTGCCTCTCTCGCAACAGAACCATCATCCTCTCCATCCACCAACCCAGCTTCAAGATCCTCTCCTGCATTGACAGGATCTTGCTGCTTTCCAAAGGAACCATAGTTCATCACGGAACCGTTGCCACCTTACAAGCCTTCTTGCACTCCAATGGCTTCACCGTCCCTCACCAACTGAATGCCTTGGAATATGCCATGGAGATTTTGAATGAGGTTAAGCCTCTCACTCTACCCAGTCTTCCTGAATCGCCCGAAAGTTCAAGTTCAAGTTCAGTAAATTTGGTTTCTGATGGTGGACGAAGTAGGAGCAGTAGAGAGACCATCATGTATAAAAGCTCTAGGGTGCACGAGATTTTCACTCTTTATATAAGGTTTTGGAGGATTATTTACCGAACTAGGCAGCTTCTTTTGACCAACACTGCTGAAGCGCTTCTCGTGGGGCTTGTGTTGGGAACTATTTATATCAACATAGGGTTTGGTAAAGAAGGGATTGAGAAAAGGTTTGGTCTATTTGCTTTCACTCTCACATTTCTGTTATCTTCCACCACAGAAACCCTTCCCATCTTCATCAACGAGAGGCCTATCATTTTAAGAGAAACTTCCAGTGGGGTTTATAGGCTTTCCTCTCATCTCATTGCAAATACGCTTGTTTTCTTGCCCTACTTGTTCGTTGTTGCTGTTATATATTCTATCCCGGTTTACTTCTTAGTTGGCCTTTGTGCTTCCTGGCTTTCTTTCGCTTACTTTGTTTTGGTCATTTGGGTCATAGTTCTCATGGCTAACTCCTTCATCCTCTTCTTGAGCTCTCTAGCACCCAACTACATTGCCGGAACTTCGCTCTTGACGGTGCTTCTCGCAGCGTTTTTTCTCTTCTCTGGTTACTTTATCTCCAAGGATAGCTTGCCCAAGTACTGGCTCTTCATGCACTTCTTGTCTATGTACAAATACGCTCTTGATGCTCTTCTCATCAACGAGTACTCGTGCTTGGTGACCAAGTGTTTGATATGGTACCAGGAGAATGAACAGTGCATGATCACTGGTGCTGACGTGCTACAGAAGAGAGGGCTCAAAGAGAGTGAAAGGTGGACCAACGTGTACTTCTTGATCGGGTTCTTTGTGCTGTATCGTTTGCTTTGCTTCTTGGTTTTGATTCGGAGGGTCTCGAGATCGAAAACATAA 1803 0.5019 MEHQSPPPPPPLPPKTYTLTATSICYTKSSSTKLPPLFNHCTTPPPYILKDISLTAHPSQILAVVGPSGAGKSTLLDILAARTLPSHGTLSLNSSPLIPSSFRKLSSYVPQHDHSLPLLTVSETFLFAATLLKPSAPNLPSLVSQLLSQLRLSHLAHTRLSHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSTSAFKVMQILKQTCLSRNRTIILSIHQPSFKILSCIDRILLLSKGTIVHHGTVATLQAFLHSNGFTVPHQLNALEYAMEILNEVKPLTLPSLPESPESSSSSSVNLVSDGGRSRSSRETIMYKSSRVHEIFTLYIRFWRIIYRTRQLLLTNTAEALLVGLVLGTIYINIGFGKEGIEKRFGLFAFTLTFLLSSTTETLPIFINERPIILRETSSGVYRLSSHLIANTLVFLPYLFVVAVIYSIPVYFLVGLCASWLSFAYFVLVIWVIVLMANSFILFLSSLAPNYIAGTSLLTVLLAAFFLFSGYFISKDSLPKYWLFMHFLSMYKYALDALLINEYSCLVTKCLIWYQENEQCMITGADVLQKRGLKESERWTNVYFLIGFFVLYRLLCFLVLIRRVSRSKT* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g02002 600 Pfam ABC-2 type transporter 222 280 IPR043926 GO:0140359
Lapu7g02002 600 MobiDBLite consensus disorder prediction 288 308 - -
Lapu7g02002 600 Pfam ABC-2 type transporter 325 534 IPR013525 GO:0016020|GO:0140359
Lapu7g02002 600 MobiDBLite consensus disorder prediction 287 308 - -
Lapu7g02002 600 FunFam ATP-binding cassette transporter 38 258 - -
Lapu7g02002 600 ProSitePatterns ABC transporters family signature. 164 178 IPR017871 GO:0005524|GO:0016887
Lapu7g02002 600 SMART AAA_5 58 242 IPR003593 GO:0016887
Lapu7g02002 600 Gene3D - 39 260 IPR027417 -
Lapu7g02002 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 256 IPR027417 -
Lapu7g02002 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 585 - -
Lapu7g02002 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 265 IPR003439 GO:0005524
Lapu7g02002 600 Pfam ABC transporter 49 192 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g02002 Lapu-Chr7 36267955 36270101 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g02002 38 259 Calmodulin-binding Proteins AT2G36910 26.587 1.88e-15 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g02002 K05681 - gmx:100790712 910.598