Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01998 ATGGAACAGAAACACGTGTTGTTGTCAGCATTGAGTGTTGGGGTTGGATTGGGCGTGGGACTTGGATTGAGCACAGGACATGCTGTTCAAAAATGGGTTGGAGGGAGTAGTGAGTCTGATGAGATTTCTGGGGAGCAAATTGTGCTGGAGCTCAATAAGAAAGTCATTGATGGGAAGAACAGCAAAACAACATTTAAAGAATTTCCTTATCACTTAAGTGAAATAGACCAATTTCGGTTAACAAGTGCTGGATATGTTTATTTAAAACAAGACTTTTCCAAGCACATGAGGAGCCTTTGTCCAGCAAGCAGAGCTATTTTGCTTTCTGGACCTGCAGAACTTTATCAGCAAAAGCTTGTCCAAGCTTTAGCTCATTGCTTTGAATCGAAGTTACTGCTGCTAGACATAATTGACTTCTCATTGGAGATGCAGAGGAAATATGGATGTCCCAGAAAAGAACCATATTTTAAAAGGTCCATTTCTGAGGTGACTTTGGAGCGAGTGTCTGGTTTGTTTGGGTCCTTTCCAATCCTTCCTTCAACTGGCAGAACCAGAGGTACACTACTTCGACAGAATAGTGAAATTGAAAATTCCAGCAATCCTCTGAAACTTTGTAGGAACGCCTCTACTGCATGTGATACGATTAGCTCTTCTCAATATGATCAATCAGATCCAGCTCCTTTGAAGTGCACGAGCGGCTTCTGTTTTGATGAAAAGCTCTTCGTGCAGTCACTTTATAAGGTCTTGGTTTCTATCTCAGAAACCAGTTCCATTATTTTATATATCAAGGATGCTGAGAAGCTCTTTGTTCGGTCACCAAGGCTACACAATTTGTTCCAAATGTTAATAAAGAAACTTTCAGGACCAGTATTAGTACTCGGTTCCCGGATATGTGATTCTGAAGACGATCAAGCAATTGATGACAAGCTCACTATGTTATTCCCTTACAACATTGATATCGAACCACCTCAAGATGACACCCATCTTGCAAACTGGAAAACCAAACTGAAGGAGGACATGAAAACAATTCTGTTTCAAGACAGCAGAAACCACATTGCTGAAGTACTTGCGGCAAGTGACATTGATTGTGATGACTTGAATTCAGTCTGCCATGCTGACACTAAGCTACTCAGTAATTGTATTGAAAAGATTGTGGCATCTGCAGTTTCTTACCACCTTACGATGAATAAACCGGAATACCGAAATGGAAAATTAGTTATATCAGCCAAGAGTTTGTCCTATGTATTGAGTTTGTTCCAGAAAAGTGAAAGTAATTCGGAGACTAATGATTCAAACAAGGATGTTCCTCCTGACAACGAGTACGAGAAGCGCATGAGAGCAGACGTTGTGCCAGCAAAAGAGATAGGAGTTAGATTTGAAGATATCGGGGCACTGGATGATATTAAAGAATTACTTCAAGATGAGGTCCTTCTTCCCCTCAGAAGACCAGATTTATTCAATGGTGGGCTTTTGAAGCCTTATAAAGGTATATTGCTTTTTGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAGGCCATTGCAAGTGAAGCTGGAGCAAGTTTCATTAATGTCTCAATCTCGAACATCACTTCGAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTTTCGCTGGCAGCAAAGGTTGCTCCAACTATTATTTTTATTGATGAGGTTGATAGCATGCTTGGGCAACGGACTAAATCTGGAGAGCATGAGGCAATGAGAAAGATTAAGAATGAATTCATGGTCCACTGGGATGGGCTATTGTCAAAACCTGGTAAGCGAATTCTGGTTCTTGCTGCAACTAACAGGCCATATGACCTTGATGAAGCAATTATAAGACGGTTTGAGCGCAGGATCATGGTTGGTATTCCATCTGCTGAAAACAGGGAAATGATCTTGAAAACTCTCCTAGCTAAGGAAAAATGTGAAAATATTGACTTTAAAGAGCTTTCAATCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCACGGCTGCAGCTTATCGACCTGTTAGAGAGCTACTAAGACAGGAGAGGTTGAAGGAAAAGGAAGAGAAGAAAACGGAGGCAGAAGTTCAAAGCTCAGAAAATACTTCTGACGCTAAAGAAGATAAAGAACACCAACTCATCACTTTGAGACCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTCAAGTGACTGCTAGTTTTGCAGCAGAAGGATCAATAATGAGTGAGCTGGAGGAGTGGAATGATTTATTTGGAGAAGGAGGTTCAAGGAAGAAGAAGCAGGAGCAGCTTACTTATTTCCTTTAG 2322 0.4087 MEQKHVLLSALSVGVGLGVGLGLSTGHAVQKWVGGSSESDEISGEQIVLELNKKVIDGKNSKTTFKEFPYHLSEIDQFRLTSAGYVYLKQDFSKHMRSLCPASRAILLSGPAELYQQKLVQALAHCFESKLLLLDIIDFSLEMQRKYGCPRKEPYFKRSISEVTLERVSGLFGSFPILPSTGRTRGTLLRQNSEIENSSNPLKLCRNASTACDTISSSQYDQSDPAPLKCTSGFCFDEKLFVQSLYKVLVSISETSSIILYIKDAEKLFVRSPRLHNLFQMLIKKLSGPVLVLGSRICDSEDDQAIDDKLTMLFPYNIDIEPPQDDTHLANWKTKLKEDMKTILFQDSRNHIAEVLAASDIDCDDLNSVCHADTKLLSNCIEKIVASAVSYHLTMNKPEYRNGKLVISAKSLSYVLSLFQKSESNSETNDSNKDVPPDNEYEKRMRADVVPAKEIGVRFEDIGALDDIKELLQDEVLLPLRRPDLFNGGLLKPYKGILLFGPPGTGKTMLAKAIASEAGASFINVSISNITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRTKSGEHEAMRKIKNEFMVHWDGLLSKPGKRILVLAATNRPYDLDEAIIRRFERRIMVGIPSAENREMILKTLLAKEKCENIDFKELSIMTEGYTGSDLKNLCTAAAYRPVRELLRQERLKEKEEKKTEAEVQSSENTSDAKEDKEHQLITLRPLNMEDMRQAKSQVTASFAAEGSIMSELEEWNDLFGEGGSRKKKQEQLTYFL* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01998 773 Gene3D - 629 704 - -
Lapu7g01998 773 SMART AAA_5 493 630 IPR003593 GO:0016887
Lapu7g01998 773 Pfam AAA+ lid domain 649 690 IPR041569 -
Lapu7g01998 773 Pfam ATPase family associated with various cellular activities (AAA) 497 626 IPR003959 GO:0005524|GO:0016887
Lapu7g01998 773 Coils Coil 679 699 - -
Lapu7g01998 773 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 456 630 - -
Lapu7g01998 773 MobiDBLite consensus disorder prediction 690 715 - -
Lapu7g01998 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 456 684 IPR027417 -
Lapu7g01998 773 ProSitePatterns AAA-protein family signature. 600 619 IPR003960 GO:0005524|GO:0016887
Lapu7g01998 773 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 50 772 - -
Lapu7g01998 773 Gene3D - 456 628 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01998 Lapu-Chr7 36226860 36235042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01998 457 730 Calmodulin-binding Proteins AT3G56690 37.993 2.05e-47 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01998 - - gmx:100793760 1173.3